USGS

ISIS 2 Documentation


Isis ISIS Program List - Alphabetical

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This page contains a menu of all ISIS programs. Click on a program name to get complete user documentation on the program

NOTE: All programs are invoked through TAE unless specified as IDL

Alphabetical Listing of Programs

add_reseaux Add reseaux information to a pixel measurement file
add add a band or a cube to a cube
addspec Add a spectrum to a cube
affinefit Produce a reg file defining an affine transformation fit
asc2tbl Translate TABLE from ASCII format to ISIS binary format
automat Finds overlap points of images
automos Mosaic a list of image files
average (PICS) No Documentation
avg_sd Compute the average and/or standard deviation of a cube
b4equal Find statistics about cubes for use by EQUALIZER
b16mad (PICS) No Documentation
back2core Transfer set of backplanes to core of a new cube file
bandfloat Apply separate base/multiplier to each band in a cube
bandcopy Copy core band or backplane of cube into another cube
bandstats Compute statistics for individual bands
bandtab Create a TABLE file of BAND_BIN information from a cube file
base Project base mosaic to LEVEL1 image format
base2l1 Create TFILE to project a mosaic to "level1" geometry
bef Bit Error Filtering Program
bin2str Convert INTEGER and/or REAL values to strings
bin5r (IDL) Read a BIN5 format file into an IDL array
bin5w (IDL) Write an IDL array to a BIN5 format file
blend Apply polynomial correlation function to an image
bndsynprc Synthesize missing image data for three bands of a cube
boxfilter Three dimensional boxcar filter on cube data
calmrg Level1 / merge exposure pairs for Clementine LUB filter
cd2isis (PICS) No Documentation
cd2pics (PICS) No Documentation
change_4 Convert a qmatch list of Clem. pixel measurements to mm
chardip Create a unit tilt toward sun file
chipper Subpixel register a point in one image to point in another
circle NULL area outside a given circle
check_net check that all images are connected by match points
cleanlab Attempts to set FILE_STATE to CLEAN
clem0 (Level 0) First step processing for Clementine data
clem2isis Converts compressed Clementine images to ISIS cubes
clemchange Convert a qmatch list of Clem. pixel measurements to mm
clemgroup Get all filters in same area as one filter
clempair Create list of cubes to process sorted by exposure pairs
clemphot Photometric correction for Clementine UVVIS images
clemprod Provides services for Clementine Product Id Master Database
cleanrx Remove low level of noise from image plane
convert Convert cube data format to different computer platforms
coreg Subpixel registration of a pair of images
coreg2 Subpixel registration of a pair of images
coregpr Create control point file with 1/5 pixel registration
coregpr2 Create control point file with 1/5 pixel registration
cosi Divide by cos(incidence angle) from backplane
cpylab Copies keyword labels from one file to another
cube2ascii Converts isis (1 band) to ascii output file
cubeavg Creates a spectral average cube
cubeit Stack image cubes together in the band dimension.
cubelook Interactively examine and replace cube pixel values
cubespec Calculate average spectrum from disk cube file
cubestack Stacks two input cube files in the LINE dimension
cv (IDL) Interactive Cube Visuslization
cvplot (IDL) Interactive Cube Visualization plot program
daisy Create a "flower petal" projection for globes
deltack Make angular adjustments to camera pointing and create CK
ddd2isis Convert MOC ddd image to ISIS cube
desmear Remove frame transfer smear
dform Convert ISIS cube to different format and bit-type
dsk2dsk Determine or set the valid core data range
dstripe Destripe image using a sequence of boxcar filters
dtmradius Update a RAND control point file with radii from a DTM
eanorm Equal area normalization of each spectrum
equalizer Write PDF to correct brightness differences between cubes
errors Find errors in ISIS session log file (print.prt)
example (IDL) Illustrates how to access ISIS cube from IDL
expmrg level1 / merge exposure pairs for Clementine (any filters)
findmatch Create pdf for MATCHPT of overlapping Clementine images
findmatch2500
findrx Find Reseau coordinates and write them to the label
fit Compute polynomial functions, Y(X), to correlate two images
fixlucas Converts Lucas Point Perspective labels to ISIS labels
fixtrx Fix null tracks in a Viking image plane
fx Generalized arithmetic operations using multiple cube files
geoback Create backplanes with geometric information
geom Geometric transformation of image planes in an ISIS cube file
genapdat Generates a priori data for a randlsq solution.
getcirc Compute the center line, sample and radius
getcol Return index(th) filename to calling procedure
getcount Count number of lines in ascii list file
getfname Return index(th) filename to calling procedure
getfname5 Return 5 filenames on index(th) line to calling procedure
getkey Get keyword value(s) from a cube file label
getrange Get latitude and longitude range of a list of images
getutc Convert ephemeris time to UTC format
gllfixlabel Update the labels in a GALILEO SSI image
grid Draw a grid on a cube
hdr_convert Convert hardware configuration of NIMS HDR file
hdrkeys Set keywords in Table file for ISL spectrum header info
hist (PICS) No Documentation
hicut Show actual area covered by each image in a Mars 1:500k mosaic
hidim Create procedures for high resolution Mars mapping project
hilev3a Create two groups of HPF files for Mars 1:500k mapping
hilev3b Mosaic HILEV3A output images for Mars 1:500k mapping project
hilev4 Add HPF mosaic and LPF mosaic for Mars 1:500k mapping
hilomatch Match Clementine uvvis high exposure to low exposure
hist2d Compute 2-D histogram
histplane Create histogram(s) of image bands in a cube.
hrscfill Fill in missing lines of a MEX HRSC image
hrscsep Separate MEX HRSC file into individual parts
hstret Calculate stretch table from histograms of each band
imp2prj Create TFILE for Mars Pathfinder IMP cube map projections
imp_fixlabel Update the labels in an IMP image
implab Limited corrections to the label of IMP images.
imprange Do stereo range calculations for IMP images
isis2gisworld Create GIS header and/or World file from a Level 2 ISIS cube
isis2pds Convert ISIS cube file to standard PDS image file
isis2pics (PICS) No Documentation
isis2raw Converts an ISIS cube into an unlabeled raw image
isis2tif Convert an ISIS cube file to a Tagged Image File Format
isis2std (IDL) Convert ISIS cube to standard image file
isisdiff Compute difference statistics between two cubes.
isisinfo Report detailed information about an ISIS file
isisparam Pass parameter values back to the calling shell
isisdoc Create formatted documentation of programs and procedures
islist List spectral header fields from ISL file
iss2isis Convert Vicar-formatted Cassini ISS images to ISIS format
isschange Convert a qmatch list of pixel measurements to mm
jigsaw Correct camera angles on the labels of a group of images
lab2mat Copy match points from labels to table file
lab2spice Update SPICE file from data on cube labels
labels Lists or modifies CUBE or TABLE file labels
last2prj Create TFILE for LANDER STEREO (LAST) cube map projections
lastjig Correct camera angles on the labels of a group of LAST images
lev_findrx Find Reseau coordinates and write them to the label
lev1geoplane Write geometry information to backplanes or new cube.
lev1matcherr Report matchpoint errors for a set of level1 cubes
lev1prop Propagate level 1 keyword groups to another file
lev1stats Generates geometric statistics for a cube
lev1tolev1 Match two level 1 images
lev1tolev2 Make tfile for level 1 to level 2 conversion
lev1torand Generate RAND information for a point in a level1 cube
lev2grid Create file for plotting graticules(PostScript).
lev2lab Put map projection information on cube labels
lev2raster Rasterize data using latitude, longitude coordinates
lev2tolev2 Make tfile for level 2 to level 2 conversion
level2 Trim and project image to sinusoidal-equal area projection
levgeoplane Write geometry information to backplanes or new cube.
levinit Initialize the processing information on the labels
levpt Generate geometric information for a point(s) in a cube
levsetlab Set the PHOTO_DEM keyword in image labels
lincont Linear continuum removal of each spectrum
linearize Linearize Mariner 9 images
linfit Perform linear least squares fit of one image to other image(s)
list List DN values for a single band/backplane
lochange Convert a qmatch list of pixel measurements to mm
lofixlabel Update the labels in a Lunar Orbiter complete frame.
lomarkfid Mark the fiducials in a Lunar Orbiter cube
lostpckt Find lost packets (dropped compression blocks) in IMP
losupport2ck1 Convert Lunar Orbiter az, tilt, & swing to NAIF ck
list (PICS) No Documentation
mad (PICS) No Documentation
m9mlrp Mariner 9 Missing Line Repair Program
m9psr Mariner 9 pinstripe removal
m9radiom Mariner 9 Radiometric Correction
m9res Subtracts residual image from Mariner 9 images
magcube Scale cube up or down using bilinear interpolator
makeflat Creates a flat-field image from a set of input images
makeground Create ground points from match point sets, cube list
makespk09 Convert Lunar Orbiter support data to Naif spk
maketopo Create topo file for any planet
makinfocus Make projection plane def file from initialized MI or PANCAM cube
maplab Put map projection information on cube labels
mar10cal Radiometric correction of Mariner 10 images (Experimental)
mappars Extensive description of MAPPARS parameter
mask Mask cube with single core band, all core bands or a backplane
mask (PICS) No Documentation
mat2lab Copy match points from table file to labels
matchpt Calculates and records three match points for 2 images
matprt List match table file
mea_replace Merge/reformat millimeter measurements
mer2isis Convert MER flight/calibration images to ISIS format
mer2pds Convert MER flight/calibration images to PDS format
merfixlab Fix keywords in MER level 1 image labels
mergempt Merge two match point files into one
mergermb Merge entries from one geometry spice table into another
merlev1tolev2 Make tfile for level 1 to level 2 conversion
merlevinit Initialize the processing information on the labels
merlevpt Generate geometric information for a point(s) in a cube
mermos Mermos cubes
mex2isis Convert Vicar-formatted MEX images to ISIS format
mgstime convert between different MGS time formats
mirror flips a cube from left-to-right
mkreseau Create RAND listing of reseaus
moc_fixlabel Update the labels in an MGS MOC image
mocaspect Perform aspect ratio correction of MOC Level1 image
mocbtbl Create table file of "lev1stats" output
moccal Radiometric correction of Mars Global Surveyor MOC images
mocevenodd Remove even/odd from MOC images
mocftp Download MOC images or MOLA pedr data
mocindex List image information found in the cumindex.tab file
mocgap Fix data gap in MOC images
moclev0 Convert PDS MOC images to ISIS format
moclev1 Perform radiometric correction on MOC images
moclev2 Project Level 1 MOC image to a map projection
moclevall Process MOC images thru moclev0,moclev1 & moclev2
mocmola Create MOLA table file based on MOC image time
mocnawa mosaic MOC NA & WA level2 simultaneous frames
mocnoise50 Remove noise spikes from MOC images
mocrange Apply range of MOC statistics to ISIS table file
mocsearch search for a select set of PDS MOC images by range contraints
moctime Find the time span of a MOC image
mola2isis Create MOLA table file based on MOC image and pedr
molasearch Find MOLA PEDR filenames for specified time range
month1_2 Apply phase angle correction to selected bands
mosaic Mosaic cubes
mospdf Creates a PDF procedure that runs "mosaic"
mpt_stats Print descriptive statistics of qmatch file
mr9fixlabel Update the labels in a Mariner 9 image
mrgfile "echo" information to output file for CALMRG.PDF
msi2isis Converts NEAR Discovery MSI images to ISIS cubes
mult multiply a cube by a band
multcs Compute product of cube and spectrum from a table file
multiimp (IDL) Run "tvimp" to process list of IMP images
multimatch (IDL) Run "tvtie" to process "matchpt" output list
naiflab Add "SPICE" data to cube labels from NAIF kernel files
nav2isis Create ISIS IMP file list from PDS Navigator output
nearq2cam Convert quaternions to camera angles for NEAR
newmap Change geometry of sinusoidal or simple cyclindrical image
new_voyager Convert a qmatch list of Vik. pixel measurements to mm
nimsboomsten Stencil boom obscuration in a NIMS "tube"
nimsgeom Project NIMS data to map projection
nimsgeoplane Create NIMS geom. backplanes for all grating positions
nimstplane Create x,y (map) backplanes for NIMS data for all grating
nomrgfile "echo" information to output file for CALMRG.PDF
noproj Compute camera distortions.
noseam Level 4 / Boxfilter (LPF,HPF) mosaic seam removal
nullsat NULL area outside a given circle
nuproj Create a tfile for map transformations
orange Detailed description of ORANGE parameter
outlin (PICS) No Documentation
outline outline distinct DN sections in an image
pathtool Search and replace paths in ISIS keyword labels
pc2d Perform interactive photoclinometry
pcinfo Calculate information needed for photoclinometry
pcsi Two dimensional photoclinometry "smart interpolation".
pds2isis Convert PDS image file to ISIS cube file
pho_emp_global Fit empirical photometric functions to Hapke
pho_emp_local Fit empirical photometric functions to Hapke
photbug Apply phase angle correction to selected bands
photom Apply photometric correction
photomet Perform photometric corrections on a cube.
photompr Photometric Correction Parameters
photosort Sort a list of images based on photo statistic constraints
photostat Give geometric information about the image
pics2isis (PICS) No Documentation
picslabels (PICS) No Documentation
pix2mm Convert pixel measurements to millimeter measurements.
plancd Read JPL archive CD files and write to disk
planlab Updates planet information on image labels
planorth Create TFILE for Planetary cubes in Orthographic
plansinu Create TFILE for Planetary cubes in Sinusoidal
planspace Create TFILE for plotting Right ascension and Declination
pntreg Subpixel register list of match points
pointfix Correct camera pointing
pointvu Project undistorted point perspective with topography
poly Polynomial algebra on an input cube
polyfit Find coefficients of polynomial fit at each pixel
ppp_replace Merge/reformat RAND PPP data
qmatch Interactive match point picking program
qview Display cube
rad2isis Convert PDS-formatted Cassini BIDR Radar files to ISIS format
radar Rand radar least squares solution
radfloat Float band-dependent-scaled NIMS radiance cube
rand2ck1 Convert camera angles in Rand format to Naif ckernel
rand2kerns Convert solved polynomials from Themis solution to Naif kernels(ck & spk)
randlsq Perform photogrammetric adjustment
random Transform image with random control
rasrange Determine lat/lon range of raster data
ratio Ratio each spatial plane by a given spatial plane
ratiocs Compute ratio of cube and spectrum from a table file
raw2isis Transfers raw images into an ISIS cube
readbackplane (IDL) Read backplane of ISIS cube file into an IDL array
readisis (IDL) Read ISIS cube file data into an IDL array
readmocisis Decompress an MGS/MOC SDP file to create a PDS image
readmocdrvisis Driver for the MGS/MOC readmocisis program
readpfx Read prefix bytes in a MEX HRSC file
regcolor Find common lat,lon range and project to SINU or ORTH
remrx Remove Reseaus from an input image
roilist List pixel values within a Region of Interest
rot180 rotates a cube clockwise 180 degrees
runimp runs the imprange and tbl2asc programs
runrandlsq Runs randlsq, the geodetic solver.
sbdr2grid Rasterize Cassini SBDR data from an ISIS table
sbdr2isis Convert Cassini SBDR table to an ISIS table
sedrsort Sort entries in a table of photostatistics (sedr)
sfrom Extensive description of SFROM parameter
shadco Add shaded relief to color cube
shade Create shaded-relief cube from topographic cube
shade (PICS) No Documentation
shadowtau get shadow stats.
shiftcube Shift camera pointing for a single cube
shiftorb Shift camera angles for an orbit
shiftreg Shift image by a line and sample offset
size Compute map size
slosin Remove periodic noise from LEVEL1 images
socet2jig Convert ISIS labels and SOCET match points to lastjig format
solardiv Divide/Multiply by BAND_BIN_SOLAR_FLUX from label
spatialmax Find the file with the largest spatial region
spam2isl Convert a SPAM library to ISL format
specfix Removes noise spikes from spectral cubes
specmsk special masking procedure
specundo "undo" the special masking procedure
specpix Replace user specified pixels with special pixel values
specpr2isl Convert a SPECPR library to ISL format
spice2rand Convert SPICE and match points to RAND format
spice2rand11000
spicegen Create SPICE file from GLL SP kernel and raw AACS
spicelab Update SPICE on cube labels
spiceprt List information from the SPICE files
ssical Perform Radiometric correction on GALILEO-SSI Imaging
stddes Standard set of destriping filters for clinometry
str2int Convert a numeric string to integer
stretch Stretch pixel values in a cube file
submit Submit a TAE batch file
subpreg "Rubber sheet" sub-pixel registration of two images
summation_mode Convert pix measurements to mm (Gal Summation Mode)
tbl2asc Translate binary TABLE object to ASCII format
tbl2isl Put Table file spectrum into an Instrument Spectral Library
tesemiss Retrieve TES Emissivity data from vanilla database
tesmap Generate projected ISIS file from TES (vanna/vanilla) data
thm2isis Convert THEMIS IR/VIS images to ISIS for lev processing
thmiric Generate THEMIS IR registered instrument coordinate cubes
thmirmc Generate THEMIS IR registered map projection cubes
thmirmcdrv Generate THEMIS IR registered map projection cubes
thmvismc Generate THEMIS VIS registered map projection cubes
thmvismcdrv Generate THEMIS VIS registered map projection cubes
tic Write tic marks on a cube
tiept Correct camera pointing using image correlation
tprint List information from the "tfile"
tran Project image in a map projection to Transverse Mercator
transpose Transpose standard 3D cube to requested storage order
trim NULL the edges of a cube
trimang Trim input image by an angular amount
trimangle Trim a cube to an angle.
trimsinu Trim edges of Sinusoidal images
tuple Create list of corresponding DN values from multiple images
tvimp (IDL) Set match points for Imager for Mars Pathfinder (IMP) image
tvtie (IDL) Interactive setting of tie points or match points.
uax2isis Convert IMP UAX format Pathfinder files to ISIS cubes
unmix Spectral unmixing
unfazed Undo phase correction
uvviscal Radiometric correction of Clementine UV/VIS camera images
viewspec (IDL) Display ISIS cube or generic cube file
vanna User interface to the ASU vanilla application
vgrfixlabel Update the labels in a VOYAGER ISS image
vik7track Zero Missing track information in EDR Viking image
vikbasefit Create a ck by fitting camera pointing to base map
vikcal Radiometric correction of VIKING Planetary images
vikftp Download Viking Orbiter EDR images
viklev0 Convert Viking Orbiter images to ISIS cub
viklev1 Create calibrated Viking Oriter Level 1 images
vlev1 Level 1 processing for Viking and Voyager data
vlonorm Variable length offset normalization of each spectrum
voycal Radiometric correction of Planetary images
voyfixlabel Update the labels in a VOYAGER ISS image
voyramp Correct Voyager 1 Io images from plasma torus irradiation
warp2 Transform cube with weighted 2nd order fit
warp3 Interpolate values in the third (brightness) dimension
wimp (IDL) Widget interface to run "tvimp"
wmatch (IDL) Widget interface to run "tvtie" in MATCH POINT mode
worst_res Convert randlsq residuals to an easy-to-read format
writeisis (IDL) Write IDL array out to the core of a new cube file
wtie (IDL) Widget interface to run "tvtie" in TIE POINT mode
xypxy0vik Convert qmatch Vik. pixel measurements to mm
zero Create a cube and fill with a constant value (default 0)

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Last updated: Mar 9 2006