Mosaic two cubes together. More...

#include <ProcessMosaic.h>

Inheritance diagram for Isis::ProcessMosaic:

Collaboration diagram for Isis::ProcessMosaic:

Public Types
enum	ImageOverlay { PlaceImagesOnTop , PlaceImagesBeneath , UseBandPlacementCriteria , AverageImageWithMosaic , NumImageOverlayOptions }
	Enumeration for different Mosaic priorities (input, mosaic, band) More...

Public Member Functions
	ProcessMosaic ()
	ProcessMosaic Contructor.

virtual	~ProcessMosaic ()
	Destroys the Mosaic object. It will close all opened cubes.

virtual void	StartProcess (const int &piOutSample, const int &piOutLine, const int &piOutBand)
	This method invokes the process by mosaic operation over a single input cube and single output cube.

virtual void	EndProcess ()
	Cleans up by closing input, output and tracking cubes.

PvlObject	imagePositions ()
	Accessor for the placed images and their locations.

virtual Isis::Cube *	SetInputCube (const QString &parameter, const int ss, const int sl, const int sb, const int ns, const int nl, const int nb)
	Opens an input cube specified by the user.

virtual Isis::Cube *	SetInputCube (const QString &fname, Isis::CubeAttributeInput &att, const int ss=1, const int sl=1, const int sb=1, const int ns=-1, const int nl=-1, const int nb=-1)
	Opens an input cube specified by the user.

Isis::Cube *	SetOutputCube (const QString &psParameter)
	Opens an output cube specified by the user.

Isis::Cube *	SetOutputCube (const QString &psParameter, UserInterface &ui)

void	SetBandBinMatch (bool enforceBandBinMatch)

void	SetBandKeyword (QString bandPriorityKeyName, QString bandPriorityKeyValue)
	Set the keyword/value to use for comparing when using band priority.

void	SetBandNumber (int bandPriorityBandNumber)
	Set the band to use for priorities when using band priority.

void	SetBandUseMaxValue (bool useMax)
	Set whether to take the image with the max or min value when using band priority.

void	SetCreateFlag (bool createOutputMosaic)
	Flag to indicate that the mosaic is being newly created Indication that the new label specific to the mosaic needs to be created.

void	SetHighSaturationFlag (bool placeHighSatPixels)
	When true, high saturation (HRS, HIS) will be considered valid data for the purposes of placing pixels in the output mosaic.

void	SetImageOverlay (ImageOverlay placement)

void	SetLowSaturationFlag (bool placeLowSatPixels)
	When true, low saturation (LRS, LIS) will be considered valid data for the purposes of placing pixels in the output mosaic.

void	SetMatchDEM (bool matchDEM)
	Set the DEM match flag.

void	SetNullFlag (bool placeNullPixels)
	When true, Null pixels will be considered valid data for the purposes of placing pixels in the output mosaic.

void	SetTrackFlag (bool trackingEnabled)

bool	GetHighSaturationFlag () const

ImageOverlay	GetImageOverlay () const

bool	GetLowSaturationFlag () const

bool	GetNullFlag () const

bool	GetTrackFlag () const

int	GetInputStartLineInMosaic () const
	This is the line where the image was placed into the output mosaic.

int	GetInputStartSampleInMosaic () const
	This is the sample where the image was placed into the output mosaic.

int	GetInputStartBandInMosaic () const
	This is the band where the image was placed into the output mosaic.

virtual Isis::Cube *	SetInputCube (const QString &parameter, const int requirements=0)
	Opens an input cube specified by the user and verifies requirements are met.

virtual Isis::Cube *	SetInputCube (const QString &fname, const Isis::CubeAttributeInput &att, int requirements=0)
	Opens an input cube specified by the programmer and verifies requirements are met.

virtual void	SetInputCube (Isis::Cube *inCube, int requirements=0)
	Set the InputCube vector to an opened Cube which was dynamically allocated.

virtual void	StartProcess (void funct())
	In the base class, this method will invoked a user-specified function exactly one time.

virtual void	Finalize ()
	Cleans up by closing cubes and freeing memory for owned cubes.

virtual Isis::Cube *	SetOutputCube (const QString &parameter, const int nsamps, const int nlines, const int nbands=1)
	Allocates a user specified output cube whose size is specified by the programmer.

virtual Isis::Cube *	SetOutputCube (const QString &fname, const Isis::CubeAttributeOutput &att, const int nsamps, const int nlines, const int nbands=1)
	Allocates a output cube whose name and size is specified by the programmer.

virtual Isis::Cube *	SetOutputCubeStretch (const QString &parameter, UserInterface *ui=nullptr)
	Allocates a user-specified output cube whose size matches the first input cube.

virtual Isis::Cube *	SetOutputCubeStretch (const QString &parameter, const int nsamps, const int nlines, const int nbands=1, UserInterface *ui=nullptr)
	Allocates a user specified output cube whose size is specified by the programmer.

void	AddInputCube (Cube *cube, bool owned=true)

void	AddOutputCube (Cube *cube, bool owned=true)

void	CheckRequirements (const Cube *cube, const int requirements)
	Checks to make sure the input cube meets the inputted requirements.

void	ClearCubes ()
	Close owned cubes from the list and clear the list.

void	ClearInputCubes ()
	Close owned input cubes from the list and clear the list.

void	ClearOutputCubes ()
	Close owned output cubes from the list and clear the list.

void	PropagateLabels (const bool prop)
	This method allows the programmer to turn on/off the propagation of labels from the 1st input cube to any of the output cubes.

void	PropagateLabels (const QString &cube)
	This method allows the programmer to propagate labels from a specific secondary cube.

void	PropagateTables (const bool prop)
	This method allows the programmer to propagate input tables to the output cube (default is true)

void	PropagateTables (const QString &fromName, const QList< QString > &tableNames=QList< QString >())
	Propagate the tables from the cube with the given filename to the output cube.

void	PropagatePolygons (const bool prop)
	This method allows the programmer to propagate input blobs to the output cube (default is true)

void	PropagateHistory (const bool prop)
	This method allows the programmer to propagate history to the output cube (default is true)

void	PropagateOriginalLabel (const bool prop)
	This method allows the programmer to propagate original labels to the output cube (default is true)

Isis::Progress *	Progress ()
	This method returns a pointer to a Progress object.

QString	MissionData (const QString &mission, const QString &file, bool highestVersion=false)
	This method reads the mission specific data directory from the user preference file, makes sure that mission is available in the Isis installation, and the attaches the provided input file to the directory in order to create a full file specification.

void	WriteHistory (Cube &cube)
	Writes out the History blob to the cube.

void	CalculateStatistics ()
	Calculates and stores off statistics on every band of every cube added to this process via the SetInputCube method.

std::vector< Isis::Statistics * >	BandStatistics (const unsigned index)
	Get the vector of Statistics objects for each band separately of a specified input cube.

Isis::Statistics *	CubeStatistics (const unsigned index)
	Get the Statistics object for all bands of a specified input cube.

Static Public Member Functions
static QString	OverlayToString (ImageOverlay)
	Convert an ImageOverlay to a QString.

static ImageOverlay	StringToOverlay (QString)
	Convert a QString to an ImageOverlay (case-insensitive).

Static Public Attributes
static const char *	TRACKING_TABLE_NAME = "InputImages"
	This is the name of the table in the Cube which will contain the image file names.

static const int	FLOAT_STORE_INT_PRECISELY_MAX_VALUE = 16777216

static const int	FLOAT_STORE_INT_PRECISELY_MIN_VALUE = -16777215

Protected Attributes
Isis::Progress *	p_progress
	Pointer to a Progress object.

bool	p_propagateLabels
	Flag indicating if labels are be propagated to output cubes.

bool	p_propagateTables
	Flag indicating if tables are be propagated to output cubes.

bool	p_propagatePolygons
	Flag indicating if blobs are be propagated to output cubes.

bool	p_propagateHistory
	Flag indicating if history is to be propagated to output cubes.

bool	p_propagateOriginalLabel
	Flag indicating if original lable is to be propagated to output cubes.

std::vector< std::vector< Isis::Statistics * > >	p_bandStats
	Holds the calculated statistics for each band separately of every input cubei after the CalculateStatistics method is called.

std::vector< Isis::Statistics * >	p_cubeStats
	Holds the calculated statistics for every band together of every input cubei after the CalculateStatistics method is called.

std::vector< Isis::Cube * >	InputCubes
	A vector of pointers to opened Cube objects.

std::vector< Isis::Cube * >	OutputCubes
	A vector of pointers to allocated Cube objects.

QSet< Isis::Cube * > *	m_ownedCubes
	A list of cubes owned by this instant.

Detailed Description

Mosaic two cubes together.

This class allows a programmer to develop a program which merges two cubes together. The application sets the position where input (child) cube will be placed in the mosaic (parent) cube and priority. The Mosaic object will merge the overlapping area.

The process has four priorities (input, mosaic, band, average) for how the input image has to be placed on the mosaic. Priority "input" will place the input image on top of the mosaic. Priority "mosaic" will place the input image beneath the mosaic. Priority "band" will place the input image on the mosaic based on the "Lessser" or "Greater" criteria between user defined band in the input and the mosaic images. Priority Average will average of valid pixels in the input and mosaic images. Choosing this priority will cause the mosaic to have twice the number of bands of the input image,with a count band for each band. The count band keeps track of number of images involved in the dn value of the mosaic. In case of special pixels and the special pixel flags being enabled, the details for each priority is described below.

This class also has the ability to track the origin of the pixel by storing the input image names in a table and assigning an index to each unique image in the order they were placed on the mosaic. If the priority is input or mosaic then tracking is done only for single band input image. Band priority can track the origin for multiple bands based on a specified band based on the criteria (Lesser or Greater). The specified band can be a number or any keyword in the label.

There are also options to copy High and Low Saturation both for Instrument and Representation and Null DN values from the input to the mosaic. These options are valid for only input(top) and band priorities.

Following are the values for the origin band depending on the pixel type

Pixel Type Default Start Value Max Value Total Images

(Bits) (No Origin) Supported

32 -16777216 -16777215 16777216 33549932 16 -32768 -32767 32767 65535 8 0 1 255 255

Tags: F(FALSE), T(TRUE), V(VALID), S(SPECIAL PIXEL HS, LS, NULL), N(NULL), I(INPUT), M(MOSAIC), HL(HS,LS)

For priority=mosaic (beneath), the input is placed beneath the mosaic i.e. the

input pixel will be copied to the mosaic only if the mosaic pixel is NULL.

Input Mosaic Output

V N I S,V HL,V M

For priority=input(on top), following is the criteria for pixel assignment:

—Options— —Images-—

HS LS NULL Input Mosaic Output

F F F V S,V I F F F S S,V M T OR T OR T V S,V I T OR T OR T S S,V I(H,L,N)

For priority=band, following is the criteria for pixel assignment:

—Options— —Images-—

HS LS NULL Input Mosaic Output

F F F V V Criteria based F F F V S I F F F S S,V M T OR T OR T S S,V I(H,L,N) T OR T OR T V V Criteria based T OR T OR T V S I

For priority=average, following is the criteria for pixel assignment:

—Options— —Images-—

HS LS NULL Input Mosaic Output Count

F F F V V Average count++ F F F V S I 1 F F F S S M 0 F F F S V M count T OR T OR T S S,V I(H,L,N) 0 T OR T OR T V V Average count++ T OR T OR T V S I 1

Author: 2003-04-28 Stuart Sides

Member Enumeration Documentation

◆ ImageOverlay

enum Isis::ProcessMosaic::ImageOverlay

Enumeration for different Mosaic priorities (input, mosaic, band)

Enumerator
PlaceImagesOnTop	ontop priority
PlaceImagesBeneath	beneath priority
UseBandPlacementCriteria	band priority
AverageImageWithMosaic	average priority
NumImageOverlayOptions

Constructor & Destructor Documentation

◆ ProcessMosaic()

Isis::ProcessMosaic::ProcessMosaic ( )

ProcessMosaic Contructor.

Initialize the class members to default

References PlaceImagesOnTop, and SetBandBinMatch().

◆ ~ProcessMosaic()

Isis::ProcessMosaic::~ProcessMosaic ( )

virtual

Destroys the Mosaic object. It will close all opened cubes.

References Isis::Cube::close().

Member Function Documentation

◆ AddInputCube()

void Isis::Process::AddInputCube	(	Cube *	cube,
		bool	owned = true )

inherited

References Isis::Process::InputCubes, and Isis::Process::m_ownedCubes.

Referenced by Isis::Process::SetInputCube(), and Isis::Process::SetInputCube().

◆ AddOutputCube()

void Isis::Process::AddOutputCube	(	Cube *	cube,
		bool	owned = true )

inherited

References Isis::Process::m_ownedCubes, and Isis::Process::OutputCubes.

Referenced by Isis::ProcessPolygons::AppendOutputCube(), Isis::ProcessMapMosaic::RingsSetOutputCube(), Isis::ProcessMapMosaic::RingsSetOutputCube(), Isis::Process::SetOutputCube(), Isis::ProcessMapMosaic::SetOutputCube(), Isis::ProcessMapMosaic::SetOutputCube(), and SetOutputCube().

◆ BandStatistics()

std::vector< Isis::Statistics * > Isis::Process::BandStatistics ( const unsigned index )

inlineinherited

Get the vector of Statistics objects for each band separately of a specified input cube.

Parameters

index The index of the input cube in InputCubes

Returns: vector<Statistics*> A list of statistics ordered by band

References Isis::Process::p_bandStats.

◆ CalculateStatistics()

void Isis::Process::CalculateStatistics ( )

inherited

Calculates and stores off statistics on every band of every cube added to this process via the SetInputCube method.

The newly calculated statistics are stored in two ways: as a vector where each entry is a single Statistics object for every band of a particular input cube, and as a vector where each entry is a vector of Statistics objects, for each band separately, of a particular input cube.

References Isis::Cube::bandCount(), Isis::Progress::CheckStatus(), Isis::Buffer::DoubleBuffer(), Isis::Process::InputCubes, Isis::Cube::lineCount(), Isis::Process::p_bandStats, Isis::Process::p_cubeStats, Isis::Cube::read(), Isis::LineManager::SetLine(), Isis::Progress::SetMaximumSteps(), Isis::Progress::SetText(), Isis::Buffer::size(), and Isis::toString().

◆ CheckRequirements()

void Isis::Process::CheckRequirements	(	const Cube *	cube,
		const int	requirements )

inherited

Checks to make sure the input cube meets the inputted requirements.

Parameters

cube Cube to check

requirements Use to specify requirements for the input file. The following requirments are checked against 1) ic_base::SizeMatch checks to make sure the input cube has the same bands, samples, and lines as the first input cube open using this method, 2) ic_base::SpatialMatch checks to make sure the input cube has the same samples and lines as the first input cube, 3) ic_base::Georeferenced checks to make sure latitude/longitudes can be obtained from the input cube, 4) ic_base::FullyGeoreferenced checks to make sure latitude/longitude, phase/incidence/emission, and other geometric parameters can be obtained from the input cube, 5) ic_base::OneBand checks to make sure the input cube has exactly one band. Note, that these requirements can be logically or'ed. For example, ic_base::SpatialMatch | ic_base::georeferenced. Defaults to 0

Exceptions

Isis::iException::Message

References _FILEINFO_, Isis::AllMatchOrOne, Isis::Cube::bandCount(), Isis::BandMatchOrOne, Isis::Cube::fileName(), Isis::Process::InputCubes, Isis::Cube::lineCount(), Isis::OneBand, Isis::Cube::sampleCount(), Isis::SizeMatch, Isis::SpatialMatch, and Isis::IException::User.

Referenced by Isis::Process::SetInputCube(), and Isis::Process::SetInputCube().

◆ ClearCubes()

void Isis::Process::ClearCubes ( )

inherited

Close owned cubes from the list and clear the list.

References Isis::Process::ClearInputCubes(), Isis::Process::ClearOutputCubes(), and Isis::Process::m_ownedCubes.

Referenced by Isis::Process::Finalize().

◆ ClearInputCubes()

void Isis::Process::ClearInputCubes ( )

inherited

Close owned input cubes from the list and clear the list.

References Isis::Process::InputCubes, and Isis::Process::m_ownedCubes.

Referenced by Isis::Process::ClearCubes(), Isis::ProcessGroundPolygons::SetStatCubes(), and Isis::ProcessMapMosaic::StartProcess().

◆ ClearOutputCubes()

void Isis::Process::ClearOutputCubes ( )

inherited

Close owned output cubes from the list and clear the list.

References Isis::Process::m_ownedCubes, and Isis::Process::OutputCubes.

Referenced by Isis::Process::ClearCubes().

◆ CubeStatistics()

Isis::Statistics * Isis::Process::CubeStatistics ( const unsigned index )

inlineinherited

Get the Statistics object for all bands of a specified input cube.

Parameters

index The index of the input cube in InputCubes

Returns: Statistics* Collections of statistics gathered on all bands

References Isis::Process::p_cubeStats.

◆ EndProcess()

void Isis::ProcessMosaic::EndProcess ( )

virtual

Cleans up by closing input, output and tracking cubes.

Reimplemented from Isis::Process.

References Isis::Cube::close(), and Isis::Process::EndProcess().

◆ Finalize()

void Isis::Process::Finalize ( )

virtualinherited

Cleans up by closing cubes and freeing memory for owned cubes.

Clears the lists for all cubes.

Reimplemented in Isis::ProcessByBoxcar, Isis::ProcessByBrick, Isis::ProcessByTile, Isis::ProcessGroundPolygons, Isis::ProcessImportPds, and Isis::ProcessPolygons.

References Isis::Process::ClearCubes().

Referenced by Isis::Process::EndProcess(), Isis::ProcessByBoxcar::Finalize(), Isis::ProcessImportPds::Finalize(), and Isis::ProcessPolygons::Finalize().

◆ GetHighSaturationFlag()

bool Isis::ProcessMosaic::GetHighSaturationFlag ( ) const

See also: SetHighSaturationFlag()

◆ GetImageOverlay()

ProcessMosaic::ImageOverlay Isis::ProcessMosaic::GetImageOverlay ( ) const

Referenced by Isis::ProcessMapMosaic::RingsSetOutputCube(), Isis::ProcessMapMosaic::RingsSetOutputCube(), Isis::ProcessMapMosaic::SetOutputCube(), and Isis::ProcessMapMosaic::SetOutputCube().

◆ GetInputStartBandInMosaic()

int Isis::ProcessMosaic::GetInputStartBandInMosaic ( ) const

This is the band where the image was placed into the output mosaic.

◆ GetInputStartLineInMosaic()

int Isis::ProcessMosaic::GetInputStartLineInMosaic ( ) const

This is the line where the image was placed into the output mosaic.

◆ GetInputStartSampleInMosaic()

int Isis::ProcessMosaic::GetInputStartSampleInMosaic ( ) const

This is the sample where the image was placed into the output mosaic.

◆ GetLowSaturationFlag()

bool Isis::ProcessMosaic::GetLowSaturationFlag ( ) const

See also: SetLowSaturationFlag()

◆ GetNullFlag()

bool Isis::ProcessMosaic::GetNullFlag ( ) const

See also: SetNullFlag()

◆ GetTrackFlag()

bool Isis::ProcessMosaic::GetTrackFlag ( ) const

See also: SetTrackFlag()

◆ imagePositions()

PvlObject Isis::ProcessMosaic::imagePositions ( )

Accessor for the placed images and their locations.

Returns: The list of placed images

◆ MissionData()

QString Isis::Process::MissionData	(	const QString &	mission,
		const QString &	file,
		bool	highestVersion = false )

inherited

This method reads the mission specific data directory from the user preference file, makes sure that mission is available in the Isis installation, and the attaches the provided input file to the directory in order to create a full file specification.

Parameters

mission	Name of the mission data directory
file	Name of the file to attach to the end of the directory
highestVersion	If set to true the method will return the highest version number of the given file. Therefore, file must contain question marks such as "file???.dat". See the FileName class for more information on versioned files. Defaults to false.

References _FILEINFO_, Isis::FileName::expanded(), Isis::FileName::fileExists(), Isis::FileName::highestVersion(), Isis::IException::Io, Isis::FileName::original(), and Isis::Preference::Preferences().

◆ OverlayToString()

QString Isis::ProcessMosaic::OverlayToString ( ImageOverlay imageOverlay )

static

Convert an ImageOverlay to a QString.

This is used to translate between mapmos, handmos, and automos' interfaces into an ImageOverlay.

References _FILEINFO_, AverageImageWithMosaic, NumImageOverlayOptions, PlaceImagesBeneath, PlaceImagesOnTop, Isis::toString(), Isis::IException::Unknown, and UseBandPlacementCriteria.

Referenced by StringToOverlay().

◆ Progress()

Isis::Progress * Isis::Process::Progress ( )

inlineinherited

This method returns a pointer to a Progress object.

Returns: Progress*

References Isis::Process::p_progress.

Referenced by Isis::Equalization::applyCorrection(), Isis::HiEqualization::calculateStatistics(), and Isis::ProcessMapMosaic::StartProcess().

◆ PropagateHistory()

void Isis::Process::PropagateHistory ( const bool prop )

inherited

This method allows the programmer to propagate history to the output cube (default is true)

Parameters

prop	Flag indicating if history is to be propagated to output cubes.

References Isis::Process::p_propagateHistory.

◆ PropagateLabels() [1/2]

void Isis::Process::PropagateLabels ( const bool prop )

inherited

This method allows the programmer to turn on/off the propagation of labels from the 1st input cube to any of the output cubes.

By default, propagation occurs automatically in the Process class when a call to either of the SetOutputCube methods is invoked. If the program * requires no propagation then utilize this method. This method can be invoked between successive calls of SetOutputCube so that some cube will have labels propagated while others will not.

Parameters

prop	Flag indicating if labels are be propagated to output cubes.

References Isis::Process::p_propagateLabels.

◆ PropagateLabels() [2/2]

void Isis::Process::PropagateLabels ( const QString & cube )

inherited

This method allows the programmer to propagate labels from a specific secondary cube.

Parameters

cube	IString containing the name of the cube containing the labels to propagate.

References Isis::PvlObject::findObject(), and Isis::Process::OutputCubes.

◆ PropagateOriginalLabel()

void Isis::Process::PropagateOriginalLabel ( const bool prop )

inherited

This method allows the programmer to propagate original labels to the output cube (default is true)

Parameters

prop	Flag indicating if original labels is to be propagated to output cubes.

References Isis::Process::p_propagateOriginalLabel.

◆ PropagatePolygons()

void Isis::Process::PropagatePolygons ( const bool prop )

inherited

This method allows the programmer to propagate input blobs to the output cube (default is true)

Parameters

prop	Flag indicating if input blobs are to be propagated to output cubes.

References Isis::Process::p_propagatePolygons.

◆ PropagateTables() [1/2]

void Isis::Process::PropagateTables ( const bool prop )

inherited

This method allows the programmer to propagate input tables to the output cube (default is true)

Parameters

prop	Flag indicating if input tables are to be propagated to output cubes.

References Isis::Process::p_propagateTables.

◆ PropagateTables() [2/2]

void Isis::Process::PropagateTables	(	const QString &	fromName,
		const QList< QString > &	tableNames = QList<QString>() )

inherited

Propagate the tables from the cube with the given filename to the output cube.

This is done at the time this method is called, not during normal processing. The names of the tables to propagate can be provided through the second paramter, by specifing a list of table names. Not providing any list (or providing an empty list) will propagate all tables.

Parameters

fromName	QString of the name of the cube containing the tables to propagate.
tableNames	List of QStrings of the names of the tables to propagate; default is empty, which indicates that all tables will be propagated.

References Isis::Cube::close(), Isis::Cube::label(), Isis::PvlObject::object(), Isis::Cube::open(), Isis::Process::OutputCubes, and Isis::Cube::read().

◆ SetBandBinMatch()

void Isis::ProcessMosaic::SetBandBinMatch ( bool enforceBandBinMatch )

Referenced by ProcessMosaic().

◆ SetBandKeyword()

void Isis::ProcessMosaic::SetBandKeyword	(	QString	bandPriorityKeyName,
		QString	bandPriorityKeyValue )

Set the keyword/value to use for comparing when using band priority.

◆ SetBandNumber()

void Isis::ProcessMosaic::SetBandNumber ( int bandPriorityBandNumber )

Set the band to use for priorities when using band priority.

◆ SetBandUseMaxValue()

void Isis::ProcessMosaic::SetBandUseMaxValue ( bool useMax )

Set whether to take the image with the max or min value when using band priority.

◆ SetCreateFlag()

void Isis::ProcessMosaic::SetCreateFlag ( bool createOutputMosaic )

Flag to indicate that the mosaic is being newly created Indication that the new label specific to the mosaic needs to be created.

Author: Sharmila Prasad (1/19/2011)

Parameters

createOutputMosaic - Set Create Flag True/False

Referenced by Isis::ProcessMapMosaic::StartProcess().

◆ SetHighSaturationFlag()

void Isis::ProcessMosaic::SetHighSaturationFlag ( bool placeHighSatPixels )

When true, high saturation (HRS, HIS) will be considered valid data for the purposes of placing pixels in the output mosaic.

◆ SetImageOverlay()

void Isis::ProcessMosaic::SetImageOverlay ( ImageOverlay placement )

◆ SetInputCube() [1/5]

Isis::Cube * Isis::Process::SetInputCube	(	const QString &	fname,
		const Isis::CubeAttributeInput &	att,
		int	requirements = 0 )

virtual

Opens an input cube specified by the programmer and verifies requirements are met.

Parameters

fname	Programmer specified work file. For example, "myfile.cub".
att	The cube attributes to use when opening the input cube.
requirements	Requirements to check that the input cube meets. See CheckRequirements().

Returns: Cube*

Exceptions

Isis::iException::Message

Reimplemented from Isis::Process.

◆ SetInputCube() [2/5]

Cube * Isis::ProcessMosaic::SetInputCube	(	const QString &	fname,
		Isis::CubeAttributeInput &	att,
		const int	ss = 1,
		const int	sl = 1,
		const int	sb = 1,
		const int	ns = -1,
		const int	nl = -1,
		const int	nb = -1 )

virtual

Opens an input cube specified by the user.

This method is overloaded and adds the requirement that only one input cube can be specified.

Returns: Cube*

Parameters

fname
att
ss	The starting sample within the input cube. This allowd the application to choose a sub-area from the input cube to be place into the mosaic. Defaults to 1
sl	The starting line within the input cube. This allowd the application to choose a sub-area from the input cube to be place into the mosaic. Defaults to 1
sb	The starting band within the input cube. This allowd the application to choose a sub-area from the input cube to be place into the mosaic. Defaults to 1
ns	The number of samples from the input cube. This allowd the application to choose a sub-area from the input cube to be place into the mosaic. Defaults to number of samples in the cube
nl	The number of lines from the input cube. This allowd the application to choose a sub-area from the input cube to be place into the mosaic. Defaults to number of lines in the cube
nb	The number of bands from the input cube. This allowd the application to choose a sub-area from the input cube to be place into the mosaic. Defaults to number of bands in the cube

Exceptions

IException

References _FILEINFO_, Isis::Process::InputCubes, Isis::IException::Programmer, Isis::Process::SetInputCube(), Isis::toInt(), and Isis::PvlObject::Traverse.

◆ SetInputCube() [3/5]

Isis::Cube * Isis::Process::SetInputCube	(	const QString &	parameter,
		const int	requirements = 0 )

virtual

Opens an input cube specified by the user and verifies requirements are met.

Returns: Cube*

Parameters

parameter	User parameter to obtain file to open. Typically, the value is "FROM". For example, the user can specify on the command line FROM=myfile.cub and this method will attempt to open the cube "myfile.cub" if the parameter was set to "FROM".
requirements	Requirements to check that the input cube meets. See CheckRequirements().

Exceptions

Isis::iException::Message

Reimplemented from Isis::Process.

◆ SetInputCube() [4/5]

Cube * Isis::ProcessMosaic::SetInputCube	(	const QString &	parameter,
		const int	ss,
		const int	sl,
		const int	sb,
		const int	ns,
		const int	nl,
		const int	nb )

virtual

Opens an input cube specified by the user.

This method is overloaded and adds the requirement that only one input cube can be specified.

Returns: Cube*

Parameters

parameter	User parameter to obtain file to open. Typically, the value is "FROM". For example, the user can specify on the command line FROM=myfile.cub and this method will attempt to open the cube "myfile.cub" if the parameter was set to "FROM".
ss	The starting sample within the input cube. This allowd the application to choose a sub-area from the input cube to be place into the mosaic. Defaults to 1
sl	The starting line within the input cube. This allowd the application to choose a sub-area from the input cube to be place into the mosaic. Defaults to 1
sb	The starting band within the input cube. This allowd the application to choose a sub-area from the input cube to be place into the mosaic. Defaults to 1
ns	The number of samples from the input cube. This allowd the application to choose a sub-area from the input cube to be place into the mosaic. Defaults to number of samples in the cube
nl	The number of lines from the input cube. This allowd the application to choose a sub-area from the input cube to be place into the mosaic. Defaults to number of lines in the cube
nb	The number of bands from the input cube. This allowd the application to choose a sub-area from the input cube to be place into the mosaic. Defaults to number of bands in the cube

Exceptions

IException::Message

References _FILEINFO_, Isis::Process::InputCubes, Isis::IException::Programmer, Isis::Process::SetInputCube(), Isis::toInt(), and Isis::PvlObject::Traverse.

Referenced by Isis::ProcessMapMosaic::StartProcess().

◆ SetInputCube() [5/5]

void Isis::Process::SetInputCube	(	Isis::Cube *	inCube,
		int	requirements = 0 )

virtual

Set the InputCube vector to an opened Cube which was dynamically allocated.

This is used if there already exists a valid opened cube

Author: Sharmila Prasad (5/7/2011)

Parameters

inCube	- Pointer to input Cube
requirements	Requirements to check that the input cube meets. See CheckRequirements().

Reimplemented from Isis::Process.

◆ SetLowSaturationFlag()

void Isis::ProcessMosaic::SetLowSaturationFlag ( bool placeLowSatPixels )

When true, low saturation (LRS, LIS) will be considered valid data for the purposes of placing pixels in the output mosaic.

◆ SetMatchDEM()

void Isis::ProcessMosaic::SetMatchDEM ( bool matchDEM )

Set the DEM match flag.

Parameters

matchDEM If true, the match is enforced between Input & Mosaic

◆ SetNullFlag()

void Isis::ProcessMosaic::SetNullFlag ( bool placeNullPixels )

When true, Null pixels will be considered valid data for the purposes of placing pixels in the output mosaic.

◆ SetOutputCube() [1/4]

Isis::Cube * Isis::Process::SetOutputCube	(	const QString &	fname,
		const Isis::CubeAttributeOutput &	att,
		const int	ns,
		const int	nl,
		const int	nb = 1 )

virtualinherited

Allocates a output cube whose name and size is specified by the programmer.

Returns: Cube*

Parameters

fname	Name of the output cube to allocate
att	The cube attributes to use when creating the output cube.
ns	Number of samples to allocate
nl	Number of lines to allocate
nb	Number of bands to allocate

Exceptions

Isis::iException::Message

References _FILEINFO_, Isis::PvlObject::addObject(), Isis::Process::AddOutputCube(), Isis::AttachedLabel, Isis::Cube::create(), Isis::PvlObject::findObject(), Isis::Process::InputCubes, Isis::Cube::label(), Isis::Cube::labelSize(), Isis::Process::p_propagateLabels, Isis::Process::p_propagateOriginalLabel, Isis::Process::p_propagatePolygons, Isis::Process::p_propagateTables, Isis::Cube::pixelType(), Isis::IException::Programmer, Isis::Real, Isis::Cube::setBaseMultiplier(), Isis::Cube::setByteOrder(), Isis::Cube::setDimensions(), Isis::Cube::setFormat(), Isis::Cube::setLabelsAttached(), Isis::Cube::setLabelSize(), Isis::Cube::setMinMax(), Isis::Cube::setPixelType(), Isis::SignedInteger, Isis::SignedWord, Isis::UnsignedByte, Isis::UnsignedInteger, Isis::UnsignedWord, Isis::IException::User, Isis::Cube::write(), and Isis::Process::WriteHistory().

◆ SetOutputCube() [2/4]

Isis::Cube * Isis::Process::SetOutputCube	(	const QString &	parameter,
		const int	ns,
		const int	nl,
		const int	nb = 1 )

virtualinherited

Allocates a user specified output cube whose size is specified by the programmer.

Returns: Cube*

Parameters

parameter	User specified output file. For example, "TO" is a popular user parameter. If the user specified TO=output.cub, then this routine would allocate the file output.cub with size specified by the first opened input cube. The output pixel type will be propagated from the first loaded input cube or will use the value in the application XML file for pixelType.
ns	Number of samples to allocate
nl	Number of lines to allocate
nb	Number of bands to allocate

Exceptions

Isis::iException::Message

References _FILEINFO_, Isis::Application::GetUserInterface(), Isis::IException::Programmer, and Isis::Process::SetOutputCube().

◆ SetOutputCube() [3/4]

Cube * Isis::ProcessMosaic::SetOutputCube ( const QString & psParameter )

virtual

Opens an output cube specified by the user.

This method is overloaded and adds the requirement that only one output cube can be specified. The output cube must exist before calling SetOutputCube.

Returns: Cube*

Parameters

psParameter User parameter to obtain file to open. Typically, the value is "TO". For example, the user can specify on the command line TO=mosaic.cub and this method will attempt to open the cube "mosaic.cub" if the parameter was set to "TO". .

Exceptions

IException::Message

Reimplemented from Isis::Process.

References Isis::Application::GetUserInterface(), and SetOutputCube().

Referenced by SetOutputCube().

◆ SetOutputCube() [4/4]

Cube * Isis::ProcessMosaic::SetOutputCube	(	const QString &	psParameter,
		UserInterface &	ui )

References _FILEINFO_, Isis::Process::AddOutputCube(), Isis::PvlObject::findObject(), Isis::Cube::label(), Isis::Cube::open(), Isis::Process::OutputCubes, and Isis::IException::Programmer.

◆ SetOutputCubeStretch() [1/2]

Isis::Cube * Isis::Process::SetOutputCubeStretch	(	const QString &	parameter,
		const int	ns,
		const int	nl,
		const int	nb = 1,
		UserInterface *	ui = nullptr )

virtualinherited

Allocates a user specified output cube whose size is specified by the programmer.

Returns: Cube*

Parameters

parameter	User specified output file. For example, "TO" is a popular user parameter. If the user specified TO=output.cub, then this routine would allocate the file output.cub with size specified by the first opened input cube. The output pixel type will be propagated from the first loaded input cube or will use the value in the application XML file for pixelType.
ns	Number of samples to allocate
nl	Number of lines to allocate
nb	Number of bands to allocate
ui	A user interface used to get the attributes needed. If null, the user interface will be obtained from the application.

Exceptions

Isis::iException::Message

References _FILEINFO_, Isis::Application::GetUserInterface(), Isis::IException::Programmer, and Isis::Process::SetOutputCube().

◆ SetOutputCubeStretch() [2/2]

Isis::Cube * Isis::Process::SetOutputCubeStretch	(	const QString &	parameter,
		UserInterface *	ui = nullptr )

virtualinherited

Allocates a user-specified output cube whose size matches the first input cube.

Returns: Cube*

Parameters

parameter	User specified output file. For example, "TO" is a popular user parameter. If the user specified TO=output.cub, then this routine would allocate the file output.cub with size specified by the first opened input cube. The output pixel type will be propagated from the first loaded input cube or will use the value in the application XML file for pixelType.
ui	A user interface used to get the attributes needed for SetOutputCube.

Exceptions

Isis::iException::Message

References _FILEINFO_, Isis::Process::InputCubes, Isis::IException::Programmer, and Isis::Process::SetOutputCubeStretch().

Referenced by Isis::Process::SetOutputCubeStretch().

◆ SetTrackFlag()

void Isis::ProcessMosaic::SetTrackFlag ( bool trackingEnabled )

◆ StartProcess() [1/2]

void Isis::ProcessMosaic::StartProcess	(	const int &	os,
		const int &	ol,
		const int &	ob )

virtual

This method invokes the process by mosaic operation over a single input cube and single output cube.

Unlike other Isis process objects, no application . function will be called. The processing is handled entirely within the mosaic object. The input cube must be pixel aligned with the output cube before mosaiking. If the input cube does not overlay any of the output cube, no processing takes place. There are 3 priorities input, mosaic and band. Has the ability to track the origin of the mosaic if the flag is set. Some conditions apply like tracking turned off for multiband input with input or mosaic priority.

Parameters

os	The sample position of input cube starting sample relative to the output cube. The cordinate is in output cube space and may be any integer value negative or positive.
ol	The line position of input cube starting line relative to the output cube. The cordinate is in output cube space and may be any integer value negative or positive.
ob	The band position of input cube starting band relative to the output cube. The cordinate is in output cube space and must be a legal band number within the output cube.

Exceptions

IException::Message

Author: Sharmila Prasad (8/25/2009)

References _FILEINFO_, AverageImageWithMosaic, Isis::Progress::CheckStatus(), Isis::Cube::close(), Isis::SerialNumber::Compose(), Isis::Cube::create(), Isis::Cube::deleteBlob(), Isis::FileName::expanded(), Isis::Cube::fileName(), Isis::Process::InputCubes, Isis::IsHighPixel(), Isis::IsLowPixel(), Isis::IsNullPixel(), Isis::IsValidPixel(), Isis::Cube::label(), Isis::Cube::open(), Isis::Process::OutputCubes, Isis::Process::p_progress, Isis::FileName::path(), PlaceImagesBeneath, PlaceImagesOnTop, Isis::IException::Programmer, Isis::Cube::read(), Isis::FileName::removeExtension(), Isis::Cube::setDimensions(), Isis::Progress::SetMaximumSteps(), Isis::Cube::setPixelType(), Isis::toString(), TRACKING_TABLE_NAME, Isis::trackingTableName, Isis::PvlObject::Traverse, Isis::IException::Unknown, Isis::UnsignedInteger, UseBandPlacementCriteria, Isis::IException::User, Isis::VALID_MINUI4, and Isis::Cube::write().

Referenced by Isis::ProcessMapMosaic::StartProcess().

◆ StartProcess() [2/2]

virtual void Isis::Process::StartProcess ( void funct() )

inlinevirtualinherited

In the base class, this method will invoked a user-specified function exactly one time.

In derived classes such as ProcessByLine, the StartProcess will invoke a user-specified function for every line in a cube.

Parameters

funct() Name of your processing function

◆ StringToOverlay()

ProcessMosaic::ImageOverlay Isis::ProcessMosaic::StringToOverlay ( QString imageOverlayString )

static

Convert a QString to an ImageOverlay (case-insensitive).

This is used to translate between mapmos, handmos, and automos' interfaces into an ImageOverlay.

References _FILEINFO_, NumImageOverlayOptions, OverlayToString(), and Isis::IException::Unknown.

◆ WriteHistory()

void Isis::Process::WriteHistory ( Cube & cube )

inherited

Writes out the History blob to the cube.

References Isis::History::AddEntry(), Isis::iApp, Isis::Process::InputCubes, Isis::PvlObject::object(), Isis::Process::p_propagateHistory, Isis::Cube::readHistory(), and Isis::Cube::write().

Referenced by Isis::Process::SetOutputCube(), and Isis::ProcessMapMosaic::StartProcess().

Member Data Documentation

◆ FLOAT_STORE_INT_PRECISELY_MAX_VALUE

const int Isis::ProcessMosaic::FLOAT_STORE_INT_PRECISELY_MAX_VALUE = 16777216

static

◆ FLOAT_STORE_INT_PRECISELY_MIN_VALUE

const int Isis::ProcessMosaic::FLOAT_STORE_INT_PRECISELY_MIN_VALUE = -16777215

static

◆ InputCubes

std::vector<Isis::Cube *> Isis::Process::InputCubes

protectedinherited

A vector of pointers to opened Cube objects.

The pointers are established in the SetInputCube/SetInputWorkCube methods.

◆ m_ownedCubes

QSet<Isis::Cube *>* Isis::Process::m_ownedCubes

protectedinherited

A list of cubes owned by this instant.

These cubes will be deleted on finalization. Process will not take ownership of cubes allocated outside of Process. It is the caller's responsibility to delete such cubes.

Referenced by Isis::Process::AddInputCube(), Isis::Process::AddOutputCube(), Isis::Process::ClearCubes(), Isis::Process::ClearInputCubes(), Isis::Process::ClearOutputCubes(), Isis::Process::Process(), and Isis::Process::~Process().

◆ OutputCubes

std::vector<Isis::Cube *> Isis::Process::OutputCubes

protectedinherited

A vector of pointers to allocated Cube objects.

The pointers are established in the SetOutputCube method.

Referenced by Isis::Process::AddOutputCube(), Isis::Process::ClearOutputCubes(), Isis::ProcessImportPds::Finalize(), Isis::ProcessImport::ProcessBil(), Isis::ProcessImport::ProcessBip(), Isis::ProcessImport::ProcessBsq(), Isis::ProcessByBrick::ProcessCube(), Isis::ProcessByBrick::ProcessCubes(), Isis::ProcessImport::ProcessJp2(), Isis::ProcessRubberSheet::processPatchTransform(), Isis::Process::PropagateLabels(), Isis::Process::PropagateTables(), Isis::ProcessMapMosaic::RingsSetOutputCube(), Isis::ProcessByLine::SetBricks(), Isis::ProcessByBrick::SetOutputBrickSize(), Isis::ProcessByBrick::SetOutputBrickSize(), Isis::ProcessMapMosaic::SetOutputCube(), SetOutputCube(), Isis::ProcessPolygons::SetStatCubes(), Isis::ProcessGroundPolygons::SetStatCubes(), Isis::ProcessGroundPolygons::SetStatCubes(), Isis::ProcessImportPds::StartProcess(), StartProcess(), Isis::ProcessMapMosaic::StartProcess(), Isis::ProcessByBrick::StartProcess(), Isis::ProcessByBrick::StartProcess(), Isis::ProcessRubberSheet::StartProcess(), Isis::ProcessByBrick::StartProcess(), Isis::ProcessByBoxcar::StartProcess(), Isis::ProcessByQuickFilter::StartProcess(), Isis::ProcessByBrick::StartProcess(), Isis::ProcessImportPds::TranslatePdsProjection(), and Isis::ProcessByBrick::VerifyCubes().

◆ p_bandStats

std::vector< std::vector< Isis::Statistics * > > Isis::Process::p_bandStats

protectedinherited

Holds the calculated statistics for each band separately of every input cubei after the CalculateStatistics method is called.

Referenced by Isis::Process::BandStatistics(), and Isis::Process::CalculateStatistics().

◆ p_cubeStats

std::vector< Isis::Statistics * > Isis::Process::p_cubeStats

protectedinherited

Holds the calculated statistics for every band together of every input cubei after the CalculateStatistics method is called.

Referenced by Isis::Process::CalculateStatistics(), and Isis::Process::CubeStatistics().

◆ p_progress

Isis::Progress* Isis::Process::p_progress

protectedinherited

Pointer to a Progress object.

◆ p_propagateHistory

bool Isis::Process::p_propagateHistory

protectedinherited

Flag indicating if history is to be propagated to output cubes.

Referenced by Isis::Process::Process(), Isis::Process::PropagateHistory(), Isis::ProcessMapMosaic::StartProcess(), and Isis::Process::WriteHistory().

◆ p_propagateLabels

bool Isis::Process::p_propagateLabels

protectedinherited

Flag indicating if labels are be propagated to output cubes.

Referenced by Isis::Process::Process(), Isis::Process::PropagateLabels(), and Isis::Process::SetOutputCube().

◆ p_propagateOriginalLabel

bool Isis::Process::p_propagateOriginalLabel

protectedinherited

Flag indicating if original lable is to be propagated to output cubes.

Referenced by Isis::Process::Process(), Isis::Process::PropagateOriginalLabel(), and Isis::Process::SetOutputCube().

◆ p_propagatePolygons

bool Isis::Process::p_propagatePolygons

protectedinherited

Flag indicating if blobs are be propagated to output cubes.

Referenced by Isis::Process::Process(), Isis::Process::PropagatePolygons(), and Isis::Process::SetOutputCube().

◆ p_propagateTables

bool Isis::Process::p_propagateTables

protectedinherited

Flag indicating if tables are be propagated to output cubes.

Referenced by Isis::Process::Process(), Isis::Process::PropagateTables(), and Isis::Process::SetOutputCube().

◆ TRACKING_TABLE_NAME

const char * Isis::ProcessMosaic::TRACKING_TABLE_NAME = "InputImages"

static

This is the name of the table in the Cube which will contain the image file names.

Referenced by StartProcess().

The documentation for this class was generated from the following files:

/Users/chkim/repos/ISIS3/isis/src/base/objs/ProcessMosaic/ProcessMosaic.h
/Users/chkim/repos/ISIS3/isis/src/base/objs/ProcessMosaic/ProcessMosaic.cpp

Public Types

Public Member Functions

Static Public Member Functions

Static Public Attributes

Protected Attributes

Detailed Description

Following are the values for the origin band depending on the pixel type

(Bits) (No Origin) Supported

input pixel will be copied to the mosaic only if the mosaic pixel is NULL.

Input Mosaic Output

For priority=input(on top), following is the criteria for pixel assignment:

HS LS NULL Input Mosaic Output

For priority=band, following is the criteria for pixel assignment:

HS LS NULL Input Mosaic Output

For priority=average, following is the criteria for pixel assignment:

HS LS NULL Input Mosaic Output Count

Member Enumeration Documentation

◆ ImageOverlay

Constructor & Destructor Documentation

◆ ProcessMosaic()

◆ ~ProcessMosaic()

Member Function Documentation

◆ AddInputCube()

◆ AddOutputCube()

◆ BandStatistics()

◆ CalculateStatistics()

◆ CheckRequirements()

◆ ClearCubes()

◆ ClearInputCubes()

◆ ClearOutputCubes()

◆ CubeStatistics()

◆ EndProcess()

◆ Finalize()

◆ GetHighSaturationFlag()

◆ GetImageOverlay()

◆ GetInputStartBandInMosaic()

◆ GetInputStartLineInMosaic()

◆ GetInputStartSampleInMosaic()

◆ GetLowSaturationFlag()

◆ GetNullFlag()

◆ GetTrackFlag()

◆ imagePositions()

◆ MissionData()

◆ OverlayToString()

◆ Progress()

◆ PropagateHistory()

◆ PropagateLabels() [1/2]

◆ PropagateLabels() [2/2]

◆ PropagateOriginalLabel()

◆ PropagatePolygons()

◆ PropagateTables() [1/2]

◆ PropagateTables() [2/2]

◆ SetBandBinMatch()

◆ SetBandKeyword()

◆ SetBandNumber()

◆ SetBandUseMaxValue()

◆ SetCreateFlag()

◆ SetHighSaturationFlag()

◆ SetImageOverlay()

◆ SetInputCube() [1/5]

◆ SetInputCube() [2/5]

◆ SetInputCube() [3/5]

◆ SetInputCube() [4/5]

◆ SetInputCube() [5/5]

◆ SetLowSaturationFlag()

◆ SetMatchDEM()

◆ SetNullFlag()

◆ SetOutputCube() [1/4]

◆ SetOutputCube() [2/4]

◆ SetOutputCube() [3/4]

◆ SetOutputCube() [4/4]

◆ SetOutputCubeStretch() [1/2]

◆ SetOutputCubeStretch() [2/2]

◆ SetTrackFlag()

◆ StartProcess() [1/2]

◆ StartProcess() [2/2]

◆ StringToOverlay()

◆ WriteHistory()

Member Data Documentation

◆ FLOAT_STORE_INT_PRECISELY_MAX_VALUE