Isis 3 Programmer Reference
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Process class for exporting cubes to PDS4 standards. More...
#include <ProcessExportPds4.h>
Public Types | |
enum | ImageType { StandardImage, BinSetSpectrum, UniformlySampledSpectrum } |
enum | ExportFormat { BSQ, BIL, BIP, JP2 } |
Storage order enumeration. More... | |
Public Member Functions | |
ProcessExportPds4 () | |
Default Constructor - Set to default the data members. More... | |
~ProcessExportPds4 () | |
Destructor. More... | |
QDomDocument & | StandardPds4Label () |
Create a standard PDS4 image label from the input cube. More... | |
QDomDocument & | SpectralPds4Label () |
void | StandardAllMapping () |
Create the standard keywords for the IMAGE_MAP_PROJECTION group in a PDS label. More... | |
void | CreateImageLabel () |
Creates a PDS4 label. More... | |
void | StandardImageImage () |
void | OutputLabel (std::ofstream &os) |
Write the XML label to the supplied stream. More... | |
void | StartProcess (std::ofstream &fout) |
This method fills the image data of the PDS4 file using the parent class ProcessExport::StartProcess. More... | |
QDomDocument & | GetLabel () |
Return the internalized PDS4 label. More... | |
void | WritePds4 (QString outFile) |
This method write out the labels and image data to the specified output file. More... | |
QDomElement | getElement (QStringList xmlPath, QDomElement parent=QDomElement()) |
Convenience method to get an element given a path and its parent. More... | |
void | addHistory (QString description, QString date="tbd", QString version="1.0") |
Add a modification history instance by adding a Modification_Detail entry to the Modification_History element. More... | |
void | setLogicalId (QString lid) |
Allows mission specific programs to set logical_identifier required for PDS4 labels. More... | |
void | setVersionId (QString versionId) |
Allows mission specific programs to set version_id required for PDS4 labels. More... | |
void | setTitle (QString title) |
Allows mission specific programs to set the title required for PDS4 labels. More... | |
void | setSchemaLocation (QString schema) |
Allows mission specific programs to use specified versions of dictionaries. More... | |
void | setImageType (ImageType imageType) |
Create a standard PDS4 image label from the input cube. More... | |
void | setPixelDescription (QString description) |
Sets the description string which describes the pixel vales in File_Area_Observational. More... | |
void | reorder () |
This method reorders the existing m_domDoc to follow PDS4 standards and fixes time formatting if needed. More... | |
void | addSchema (QString sch, QString xsd, QString xmlns, QString xmlnsURI) |
Adds necessary information to the xml header for a pds4 class. More... | |
void | addSchema (QString xsd, QString xmlns, QString xmlnsURI) |
Adds necessary information to the xml header for a pds4 class for schema which lack schematron files (.sch) More... | |
virtual void | StartProcess (void funct(Isis::Buffer &in)) |
This method invokes the process operation over a single input cube. More... | |
virtual void | StartProcess (void funct(std::vector< Isis::Buffer * > &in)) |
virtual void | StartProcess (std::ofstream &fout) |
Write an entire cube to an output file stream. More... | |
virtual void | StartProcess (void funct(Isis::Buffer &in)) |
This method invokes the process operation over a single input cube. More... | |
virtual void | StartProcess (void funct(std::vector< Isis::Buffer *> &in)) |
virtual void | StartProcess (void funct()) |
In the base class, this method will invoked a user-specified function exactly one time. More... | |
void | SetOutputRange (const double minimum, const double maximum) |
Set output pixel range in Buffer. More... | |
void | SetOutputNull (const double value) |
Set output special pixel value for NULL. More... | |
void | SetOutputLis (const double value) |
Set output special pixel value for LIS. More... | |
void | SetOutputLrs (const double value) |
Set output special pixel value for LRS. More... | |
void | SetOutputHis (const double value) |
Set output special pixel value for HIS. More... | |
void | SetOutputHrs (const double value) |
Set output special pixel value for HRS. More... | |
double | OutputNull () |
Return the output special pixel value for NULL. More... | |
double | OutputLis () |
Return the output special pixel value for LIS. More... | |
double | OutputLrs () |
Return the output special pixel value for LRS. More... | |
double | OutputHis () |
Return the output special pixel value for HIS. More... | |
double | OutputHrs () |
Return the output special pixel value for HRS. More... | |
bool | HasInputRange () const |
void | SetInputRange () |
Set input pixel range from user. More... | |
void | SetInputRange (const double minimum, const double maximum) |
Set input pixel range from to a linear stretch. More... | |
void | SetInputRange (const double minimum, const double maximum, const int index) |
Set input pixel range from to a linear stretch. More... | |
void | SetInputRange (const double minimum, const double middle, const double maximum) |
Set input pixel range from to a piecewise linear stretch. More... | |
void | SetInputRange (const double minimum, const double middle, const double maximum, const int index) |
Set input pixel range from to a piecewise linear stretch. More... | |
void | CreateWorldFile (const QString &worldFile) |
Create a standard world file for the input cube. More... | |
void | SetOutputEndian (enum ByteOrder endianness) |
Set byte endianness of the output cube. More... | |
void | SetOutputType (Isis::PixelType pixelIn) |
Set output pixel bit type in Buffer. More... | |
void | setCanGenerateChecksum (bool flag) |
Set m_canGenerateChecksum which determines if we can generate a MD5 checksum on the image data. More... | |
bool | canGenerateChecksum () |
Return if we can generate a checksum More... | |
QString | checksum () |
Generates a file checksum. More... | |
double | GetInputMinimum (unsigned int n=0) const |
Get the valid minimum pixel value for the Nth input cube. More... | |
double | GetInputMaximum (unsigned int n=0) const |
Get the valid maximum pixel value for the Nth input cube. More... | |
double | GetOutputMinimum () |
Get the valid minimum pixel value to be written to the output file. More... | |
double | GetOutputMaximum () |
Get the valid maximum pixel value to be written to the output file. More... | |
void | setFormat (ExportFormat format) |
Sets the storage order of the output file. More... | |
template<typename Functor > | |
void | ProcessCubes (const Functor &functor) |
virtual void | EndProcess () |
End the processing sequence and cleans up by closing cubes, freeing memory, etc. More... | |
virtual void | Finalize () |
Cleans up by closing cubes and freeing memory for owned cubes. More... | |
virtual Isis::Cube * | SetInputCube (const QString ¶meter, const int requirements=0) |
Opens an input cube specified by the user and verifies requirements are met. More... | |
virtual Isis::Cube * | SetInputCube (const QString &fname, const Isis::CubeAttributeInput &att, int requirements=0) |
Opens an input cube specified by the programmer and verifies requirements are met. More... | |
virtual void | SetInputCube (Isis::Cube *inCube) |
Set the InputCube vector to an opened Cube which was dynamically allocated. More... | |
virtual Isis::Cube * | SetOutputCube (const QString ¶meter) |
Allocates a user-specified output cube whose size matches the first input cube. More... | |
virtual Isis::Cube * | SetOutputCube (const QString ¶meter, const int nsamps, const int nlines, const int nbands=1) |
Allocates a user specified output cube whose size is specified by the programmer. More... | |
virtual Isis::Cube * | SetOutputCube (const QString &fname, const Isis::CubeAttributeOutput &att, const int nsamps, const int nlines, const int nbands=1) |
Allocates a output cube whose name and size is specified by the programmer. More... | |
void | AddInputCube (Cube *cube, bool owned=true) |
void | AddOutputCube (Cube *cube, bool owned=true) |
void | ClearCubes () |
Close owned cubes from the list and clear the list. More... | |
void | ClearInputCubes () |
Close owned input cubes from the list and clear the list. More... | |
void | ClearOutputCubes () |
Close owned output cubes from the list and clear the list. More... | |
void | PropagateLabels (const bool prop) |
This method allows the programmer to turn on/off the propagation of labels from the 1st input cube to any of the output cubes. More... | |
void | PropagateLabels (const QString &cube) |
This method allows the programmer to propagate labels from a specific secondary cube. More... | |
void | PropagateTables (const bool prop) |
This method allows the programmer to propagate input tables to the output cube (default is true) More... | |
void | PropagateTables (const QString &fromName, const QList< QString > &tableNames=QList< QString >()) |
Propagate the tables from the cube with the given filename to the output cube. More... | |
void | PropagatePolygons (const bool prop) |
This method allows the programmer to propagate input blobs to the output cube (default is true) More... | |
void | PropagateHistory (const bool prop) |
This method allows the programmer to propagate history to the output cube (default is true) More... | |
void | PropagateOriginalLabel (const bool prop) |
This method allows the programmer to propagate original labels to the output cube (default is true) More... | |
Isis::Progress * | Progress () |
This method returns a pointer to a Progress object. More... | |
QString | MissionData (const QString &mission, const QString &file, bool highestVersion=false) |
This method reads the mission specific data directory from the user preference file, makes sure that mission is available in the Isis installation, and the attaches the provided input file to the directory in order to create a full file specification. More... | |
void | WriteHistory (Cube &cube) |
Writes out the History blob to the cube. More... | |
void | CalculateStatistics () |
Calculates and stores off statistics on every band of every cube added to this process via the SetInputCube method. More... | |
std::vector< Isis::Statistics * > | BandStatistics (const unsigned index) |
Get the vector of Statistics objects for each band separately of a specified input cube. More... | |
Isis::Statistics * | CubeStatistics (const unsigned index) |
Get the Statistics object for all bands of a specified input cube. More... | |
Static Public Member Functions | |
static void | translateUnits (QDomDocument &label, QString transMapFile="$base/translations/pds4ExportUnits.pvl") |
This function will go through an XML document and attempt to convert all "units" attributes to the appropriate PDS4 units format. More... | |
Protected Member Functions | |
void | identificationArea () |
This method writes the identification information to the PDS4 labels. More... | |
void | standardInstrument () |
This method translates the information from the ISIS Instrument group to the PDS4 labels. More... | |
void | standardBandBin () |
Export bandbin group to sp:Spectral Characteristics. More... | |
void | displaySettings () |
This method writes the display direction information to the PDS4 labels. More... | |
void | fileAreaObservational () |
Create and internalize an image output label from the input image. More... | |
QString | PDS4PixelType (PixelType pixelType, ByteOrder endianType) |
Helper function for converting ISIS pixel type and byte order to a PDS4 data_type value. More... | |
void | translateBandBinImage (Pvl &inputLabel) |
Export BandBin group for 2D or 3D Image format. More... | |
void | translateBandBinSpectrumUniform (Pvl &inputLabel) |
Export BandBin group for uniformly spaced 3D Spectral data format. More... | |
void | translateBandBinSpectrumBinSet (Pvl &inputLabel) |
Export BandBin group for non-uniformly spaced 3D Spectral data format. More... | |
std::vector< BufferManager * > | GetBuffers () |
std::vector< BufferManager * > | GetBuffersBSQ () |
A single line of input data from each input cube will be passed to the line processing function. More... | |
std::vector< BufferManager * > | GetBuffersBIL () |
A single line of input data from each input cube will be passed to the line processing function. More... | |
std::vector< BufferManager * > | GetBuffersBIP () |
A single band of input data from each input cube will be passed to the band processing function. More... | |
Static Protected Member Functions | |
static QMap< QString, QString > | createUnitMap (Pvl configPvl) |
Helper function for creating the unit translation map from a PVL object. More... | |
static void | translateChildUnits (QDomElement parent, QMap< QString, QString > transMap) |
Recursive method that will translate the "unit" attribute of any child elements of a given element. More... | |
Protected Attributes | |
QDomDocument * | m_domDoc |
XML label. More... | |
QString | m_schemaLocation |
QString with all schema locations required. More... | |
QString | m_lid |
QString with specified logical identifier. More... | |
QString | m_versionId |
QString with specified version id. More... | |
QString | m_title |
QString with specified title. More... | |
ImageType | m_imageType |
Type of image data to be written. More... | |
QString | m_pixelDescription |
Description of pixel values. More... | |
ExportFormat | p_format |
Current storage order. More... | |
double | p_outputMinimum |
Desired minimum pixel value in the Buffer. More... | |
double | p_outputMiddle |
Middle pixel value (minimum+maximun)/2.0 in the Buffer. More... | |
double | p_outputMaximum |
Desired maximum pixel value in the Buffer. More... | |
std::vector< double > | p_inputMinimum |
Minimum pixel value in the input cube to be mapped to the minimum value in the Buffer. More... | |
std::vector< double > | p_inputMiddle |
Middle pixel value in the input cube to be mapped to the (minimum+maximum)/2.0 value in the Buffer. More... | |
std::vector< double > | p_inputMaximum |
Maximum pixel value in the input cube to be mapped to the maximum value in the Buffer. More... | |
EndianSwapper * | p_endianSwap |
Object to swap the endianness of the raw output to either MSB or LSB. More... | |
ByteOrder | p_endianType |
The byte order of the output file. More... | |
PixelType | p_pixelType |
The bits per pixel of the output image. More... | |
std::vector< Stretch * > | p_str |
Stretch object to ensure a reasonable range of pixel values in the output data. More... | |
double | p_Null |
The output value for pixels whose input DNs are Null values. More... | |
double | p_Lis |
The output value for pixels whose input DNs are Low Instrument Saturation values. More... | |
double | p_Lrs |
The output value for pixels whose input DNs are Low Representation Saturation values. More... | |
double | p_His |
The output value for pixels whose input DNs are High Instrument Saturation values. More... | |
double | p_Hrs |
The output value for pixels whose input DNs are High Representation Saturation values. More... | |
bool | p_Null_Set |
Indicates whether p_Null has been set (i.e. More... | |
bool | p_Lis_Set |
Indicates whether p_Lis has been set (i.e. More... | |
bool | p_Lrs_Set |
Indicates whether p_Lrs has been set (i.e. More... | |
bool | p_His_Set |
Indicates whether p_His has been set (i.e. More... | |
bool | p_Hrs_Set |
Indicates whether p_Hrs has been set (i.e. More... | |
QCryptographicHash * | m_cryptographicHash |
A cryptographic hash that will generate an MD5 checksum of the image data. More... | |
bool | m_canGenerateChecksum |
Flag to determine if a file checksum will be generated. More... | |
Isis::Progress * | p_progress |
Pointer to a Progress object. More... | |
bool | p_propagateLabels |
Flag indicating if labels are be propagated to output cubes. More... | |
bool | p_propagateTables |
Flag indicating if tables are be propagated to output cubes. More... | |
bool | p_propagatePolygons |
Flag indicating if blobs are be propagated to output cubes. More... | |
bool | p_propagateHistory |
Flag indicating if history is to be propagated to output cubes. More... | |
bool | p_propagateOriginalLabel |
Flag indicating if original lable is to be propagated to output cubes. More... | |
std::vector< std::vector< Isis::Statistics *> > | p_bandStats |
Holds the calculated statistics for each band separately of every input cubei after the CalculateStatistics method is called. More... | |
std::vector< Isis::Statistics *> | p_cubeStats |
Holds the calculated statistics for every band together of every input cubei after the CalculateStatistics method is called. More... | |
std::vector< Isis::Cube * > | InputCubes |
A vector of pointers to opened Cube objects. More... | |
std::vector< Isis::Cube * > | OutputCubes |
A vector of pointers to allocated Cube objects. More... | |
QSet< Isis::Cube * > * | m_ownedCubes |
A list of cubes owned by this instant. More... | |
Process class for exporting cubes to PDS4 standards.
This class extends the ProcessExport class to allow the user to export cubes to PDS4 format.
2017-05-31 Ian Humphrey - Added check in StandardPds4Label to thrown an exception if there is no input cube set.
2017-06-01 Ian Humphrey - Added XML declaration and updated attributes for Product_Observational tag.
2017-06-02 Marjorie Hahn - Added global hash seed to force a consistent output (XML attribute order).
2017-06-02 Adam Paquette - Updated call to translation file to use a translation file in the isis data area.
2017-06-02 Makayla Shepherd - Added CreateImageLabel, FixedImageRoot, and StandardImageImage to add hardcoded values to the xml label.
2017-06-04 Adam Paquette - Added GetLabel function and updated StandardPds4Label.
2017-06-08 Marjorie Hahn - Added WritePds4 method to write out the .img and .xml Pds4 data.
2017-09-26 Jesse Mapel - Improved test coverage and documentation. Fixes #5167.
2017-10-18 Jeannie Backer & Makayla Shepherd - Added convenience method getElement and StandardAllMapping method to translate mapping information. See #5202.
2017-10-31 Jeannie Backer - Added standardInstrument() and displaySettings() translations.
2017-11-06 Kristin Berry - Added standardBandBin()
2017-11-07 Jeannie Backer - Added code to search for target in the Mapping group if no instrument group is found. Added Identification Area tranlations. Added sanity checks to getElement().
2017-11-07 Jeannie Backer - Added code to write data file info into label file. Added code to translate time format and add nil tag if empty.
2017-11-15 Jesse Mapel - Added translateUnits method to convert units to PDS4 standard format.
2017-11-16 Kristin Berry - Updated WritePds4 to put the File information first in the output File_Area_Observational.
2017-11-17 Jesse Mapel - Removed empty FixedImageRoot method.
2017-11-20 Jeannie Backer - Updated StandardImageImage() to re-order the Array_3D_Image values properly.
2017-11-21 Kristin Berry - Updated the constructor to add the xml version and encoding to the beginning of the XML file.
2018-02-05 Kristin Berry - Updated WritePds4 to remove the .xml and add a .img if the user inputs something of the form filename.xml as the image output name.
2018-05-16 Christopher Combs - Fixed typo in xml namespaces and changed History attributes to elements. Matches pds validate tool specifations.
2018-06-12 Kristin Berry - Added schema associated with the img class when it is used.
2019-03-01 Kristin Berry - Added ability to set version_id and title, added Special_Constants to define ISIS special pixel values, fixed east/west bounding coordinates swap bug. Fixes git issue #2635.
2019-06-15 Kristin Berry - Added a new addSchema() function for cases in which a schematron file is not available and added setPixelDescription to set a pixel description for the output image.
Definition at line 86 of file ProcessExportPds4.h.
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inherited |
Storage order enumeration.
Enumerator | |
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BSQ | Band sequential. |
BIL | Band interleaved by line. |
BIP | Band interleaved by pixel. |
JP2 | Compressed JPEG2000. |
Definition at line 130 of file ProcessExport.h.
Isis::ProcessExportPds4::ProcessExportPds4 | ( | ) |
Default Constructor - Set to default the data members.
Definition at line 47 of file ProcessExportPds4.cpp.
Isis::ProcessExportPds4::~ProcessExportPds4 | ( | ) |
Destructor.
Definition at line 83 of file ProcessExportPds4.cpp.
void Isis::ProcessExportPds4::addHistory | ( | QString | description, |
QString | date = "tbd" , |
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QString | version = "1.0" |
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) |
Add a modification history instance by adding a Modification_Detail entry to the Modification_History element.
If there are no existing entries, this will create a Modification_History element also.
description | The description of the modification. |
date | The date of the modification. Expected format is "YYYY-MM-DD". Defaults to "tbd". |
version | The product version. Expected format is "m.n". Defaults to "tbd". |
Definition at line 1405 of file ProcessExportPds4.cpp.
References _FILEINFO_.
void Isis::ProcessExportPds4::addSchema | ( | QString | sch, |
QString | xsd, | ||
QString | xmlns, | ||
QString | xmlnsURI | ||
) |
Adds necessary information to the xml header for a pds4 class.
sch | Schematron filename without path |
xsd | Schema filename without path |
xmlns | The xml namespace used |
xmlnsURI | Full URL to the xml namespace URI. Also used as the location of the sch and xsd |
Definition at line 1050 of file ProcessExportPds4.cpp.
void Isis::ProcessExportPds4::addSchema | ( | QString | xsd, |
QString | xmlns, | ||
QString | xmlnsURI | ||
) |
Adds necessary information to the xml header for a pds4 class for schema which lack schematron files (.sch)
xsd | Schema filename without path |
xmlns | The xml namespace used |
xmlnsURI | Full URL to the xml namespace URI. Also used as the location of the sch and xsd |
Definition at line 1026 of file ProcessExportPds4.cpp.
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inlineinherited |
Get the vector of Statistics objects for each band separately of a specified input cube.
index | The index of the input cube in InputCubes |
Definition at line 290 of file Process.h.
References Isis::Process::p_bandStats.
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inherited |
Calculates and stores off statistics on every band of every cube added to this process via the SetInputCube method.
The newly calculated statistics are stored in two ways: as a vector where each entry is a single Statistics object for every band of a particular input cube, and as a vector where each entry is a vector of Statistics objects, for each band separately, of a particular input cube.
Definition at line 737 of file Process.cpp.
References Isis::Statistics::AddData(), Isis::Cube::bandCount(), Isis::Progress::CheckStatus(), Isis::Buffer::DoubleBuffer(), Isis::Cube::lineCount(), Isis::Cube::read(), Isis::LineManager::SetLine(), Isis::Progress::SetMaximumSteps(), Isis::Progress::SetText(), Isis::Buffer::size(), and Isis::toString().
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inherited |
Return if we can generate a checksum
Definition at line 694 of file ProcessExport.cpp.
References Isis::ProcessExport::m_canGenerateChecksum.
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inherited |
Generates a file checksum.
This must be called after StartProcess.
Definition at line 704 of file ProcessExport.cpp.
References _FILEINFO_, Isis::ProcessExport::m_canGenerateChecksum, Isis::ProcessExport::m_cryptographicHash, and Isis::IException::Programmer.
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inherited |
Close owned cubes from the list and clear the list.
Definition at line 509 of file Process.cpp.
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inherited |
Close owned input cubes from the list and clear the list.
Definition at line 519 of file Process.cpp.
Referenced by Isis::ProcessMapMosaic::RingsSetOutputCube(), Isis::FileTool::saveAsReducedCube(), and Isis::ProcessMapMosaic::SetOutputCube().
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inherited |
Close owned output cubes from the list and clear the list.
Definition at line 533 of file Process.cpp.
void Isis::ProcessExportPds4::CreateImageLabel | ( | ) |
Creates a PDS4 label.
The image label will be stored internally in the class.
This method has a similar function to ProcessExportPds::CreateImageLabel. However, it will create images of object type Array_3D_Image, Array_2D_Image, or Array_3D_Spectrum.
Definition at line 120 of file ProcessExportPds4.cpp.
References _FILEINFO_.
Helper function for creating the unit translation map from a PVL object.
configPvl | The config PVL that defines the map. |
Definition at line 1511 of file ProcessExportPds4.cpp.
References _FILEINFO_, Isis::PvlObject::group(), Isis::PvlObject::groups(), Isis::PvlContainer::hasKeyword(), Isis::PvlContainer::name(), Isis::PvlObject::object(), Isis::PvlObject::objects(), and Isis::PvlKeyword::size().
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inherited |
Create a standard world file for the input cube.
This method creates a standard world file from the mapping group of the input cube.
worldFile | [in] Reference to a string containing the name of a file to write the world information to. |
Definition at line 1265 of file ProcessExport.cpp.
References Isis::Process::InputCubes, Isis::Projection::Resolution(), Isis::Projection::SetWorld(), Isis::Projection::XCoord(), and Isis::Projection::YCoord().
Referenced by Isis::ImageExporter::createWorldFile().
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inlineinherited |
Get the Statistics object for all bands of a specified input cube.
index | The index of the input cube in InputCubes |
Definition at line 304 of file Process.h.
References Isis::Process::p_cubeStats.
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protected |
This method writes the display direction information to the PDS4 labels.
Definition at line 527 of file ProcessExportPds4.cpp.
References Isis::PvlToXmlTranslationManager::Auto(), and Isis::FileName::expanded().
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virtualinherited |
End the processing sequence and cleans up by closing cubes, freeing memory, etc.
Reimplemented in Isis::ProcessImportPds, Isis::ProcessMosaic, Isis::ProcessByBrick, Isis::ProcessByBoxcar, Isis::ProcessByTile, Isis::ProcessGroundPolygons, and Isis::ProcessPolygons.
Definition at line 483 of file Process.cpp.
Referenced by Isis::ImageExporter::createWorldFile(), Isis::ProcessByBoxcar::EndProcess(), and Isis::FileTool::saveAsEnlargedCube().
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protected |
Create and internalize an image output label from the input image.
This method has a similar function to ProcessExportPds::StandardImageImage.
Definition at line 808 of file ProcessExportPds4.cpp.
References Isis::PvlToXmlTranslationManager::Auto(), Isis::FileName::expanded(), Isis::PvlObject::findObject(), and Isis::toString().
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virtualinherited |
Cleans up by closing cubes and freeing memory for owned cubes.
Clears the lists for all cubes.
Reimplemented in Isis::ProcessImportPds, Isis::ProcessByBrick, Isis::ProcessByBoxcar, Isis::ProcessByTile, Isis::ProcessGroundPolygons, and Isis::ProcessPolygons.
Definition at line 491 of file Process.cpp.
Referenced by Isis::ProcessByBoxcar::Finalize().
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protectedinherited |
A single line of input data from each input cube will be passed to the line processing function.
Note the data will be stretched based on the invocations of the SetInputRange and SetOutputRange methods.
funct | (Isis::Buffer &b) Name of your line processing function. The buffer in will contain stretched input cube pixels for an entire line of each input cube. These pixels must be written to the foreign output file (e.g, jpg, tif, etc). |
Definition at line 954 of file ProcessExport.cpp.
References _FILEINFO_, Isis::BufferManager::begin(), Isis::Process::InputCubes, and Isis::IException::Programmer.
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protectedinherited |
A single band of input data from each input cube will be passed to the band processing function.
Note the data will be stretched based on the invocations of the SetInputRange and SetOutputRange methods.
funct | (Isis::Buffer &b) Name of your band processing function. The buffer in will contain stretched input cube pixels for an entire line of each input cube. These pixels must be written to the foreign output file (e.g, jpg, tif, etc). |
Definition at line 992 of file ProcessExport.cpp.
References _FILEINFO_, Isis::BufferManager::begin(), Isis::Process::InputCubes, and Isis::IException::Programmer.
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protectedinherited |
A single line of input data from each input cube will be passed to the line processing function.
Note the data will be stretched based on the invocations of the SetInputRange and SetOutputRange methods.
funct | (Isis::Buffer &b) Name of your line processing function. The buffer in will contain stretched input cube pixels for an entire line of each input cube. These pixels must be written to the foreign output file (e.g, jpg, tif, etc). |
Definition at line 915 of file ProcessExport.cpp.
References _FILEINFO_, Isis::BufferManager::begin(), Isis::Process::InputCubes, and Isis::IException::Programmer.
QDomElement Isis::ProcessExportPds4::getElement | ( | QStringList | xmlPath, |
QDomElement | parent = QDomElement() |
||
) |
Convenience method to get an element given a path and its parent.
xmlPath | The XML path to the element to retrieve, starting at the parent element. Note: The first element of this path must be the same as the parent element passed in, unless the parent element is NULL. If the parent element passed in is NULL, then we assume that the parent is the root and a full path has been given. |
parent | The parent QDomElement of the given path. Defaults to the root element of the document. |
Definition at line 1333 of file ProcessExportPds4.cpp.
References _FILEINFO_.
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inherited |
Get the valid maximum pixel value for the Nth input cube.
Definition at line 439 of file ProcessExport.cpp.
References _FILEINFO_, Isis::ProcessExport::p_inputMaximum, and Isis::IException::Programmer.
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inherited |
Get the valid minimum pixel value for the Nth input cube.
Definition at line 428 of file ProcessExport.cpp.
References _FILEINFO_, Isis::ProcessExport::p_inputMinimum, and Isis::IException::Programmer.
QDomDocument & Isis::ProcessExportPds4::GetLabel | ( | ) |
Return the internalized PDS4 label.
If no label is internalized yet, an empty label will be returned.
Definition at line 1095 of file ProcessExportPds4.cpp.
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inlineinherited |
Get the valid maximum pixel value to be written to the output file.
Definition at line 178 of file ProcessExport.h.
References Isis::ProcessExport::p_outputMaximum.
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inlineinherited |
Get the valid minimum pixel value to be written to the output file.
Definition at line 174 of file ProcessExport.h.
References Isis::ProcessExport::p_outputMinimum.
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protected |
This method writes the identification information to the PDS4 labels.
Definition at line 468 of file ProcessExportPds4.cpp.
References _FILEINFO_, Isis::PvlToXmlTranslationManager::Auto(), Isis::FileName::baseName(), and Isis::FileName::expanded().
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inherited |
This method reads the mission specific data directory from the user preference file, makes sure that mission is available in the Isis installation, and the attaches the provided input file to the directory in order to create a full file specification.
mission | Name of the mission data directory |
file | Name of the file to attach to the end of the directory |
highestVersion | If set to true the method will return the highest version number of the given file. Therefore, file must contain question marks such as "file???.dat". See the FileName class for more information on versioned files. Defaults to false. |
Definition at line 682 of file Process.cpp.
References _FILEINFO_, Isis::FileName::expanded(), Isis::FileName::fileExists(), Isis::PvlObject::findGroup(), and Isis::FileName::highestVersion().
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inherited |
Return the output special pixel value for HIS.
Definition at line 579 of file ProcessExport.cpp.
References Isis::ProcessExport::p_His, Isis::ProcessExport::p_His_Set, and Isis::ProcessExport::p_outputMaximum.
Referenced by Isis::ProcessExport::InitProcess().
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inherited |
Return the output special pixel value for HRS.
Definition at line 587 of file ProcessExport.cpp.
References Isis::ProcessExport::p_Hrs, Isis::ProcessExport::p_Hrs_Set, and Isis::ProcessExport::p_outputMaximum.
Referenced by Isis::ProcessExport::InitProcess().
void Isis::ProcessExportPds4::OutputLabel | ( | std::ofstream & | os | ) |
Write the XML label to the supplied stream.
[out] | os | file stream to which the XML label will be written. |
Definition at line 1072 of file ProcessExportPds4.cpp.
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inherited |
Return the output special pixel value for LIS.
Definition at line 563 of file ProcessExport.cpp.
References Isis::ProcessExport::p_Lis, Isis::ProcessExport::p_Lis_Set, and Isis::ProcessExport::p_outputMinimum.
Referenced by Isis::ProcessExport::InitProcess().
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inherited |
Return the output special pixel value for LRS.
Definition at line 571 of file ProcessExport.cpp.
References Isis::ProcessExport::p_Lrs, Isis::ProcessExport::p_Lrs_Set, and Isis::ProcessExport::p_outputMinimum.
Referenced by Isis::ProcessExport::InitProcess().
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inherited |
Return the output special pixel value for NULL.
Definition at line 555 of file ProcessExport.cpp.
References Isis::ProcessExport::p_Null, Isis::ProcessExport::p_Null_Set, and Isis::ProcessExport::p_outputMinimum.
Referenced by Isis::ProcessExport::InitProcess().
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protected |
Helper function for converting ISIS pixel type and byte order to a PDS4 data_type value.
pixelType | The ISIS pixel type of the data |
endianType | The byte order of the data |
Definition at line 1365 of file ProcessExportPds4.cpp.
References _FILEINFO_.
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inlineinherited |
This method returns a pointer to a Progress object.
Definition at line 270 of file Process.h.
References Isis::Process::p_progress.
Referenced by Isis::Equalization::applyCorrection(), Isis::Equalization::calculateBandStatistics(), Isis::ProcessMapMosaic::RingsSetOutputCube(), Isis::ProcessMapMosaic::SetOutputCube(), and Isis::SpectralDefinition2D::SpectralDefinition2D().
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inherited |
This method allows the programmer to propagate history to the output cube (default is true)
prop | Flag indicating if history is to be propagated to output cubes. |
Definition at line 651 of file Process.cpp.
Referenced by Isis::ProcessMapMosaic::RingsSetOutputCube(), and Isis::ProcessMapMosaic::SetOutputCube().
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inherited |
This method allows the programmer to turn on/off the propagation of labels from the 1st input cube to any of the output cubes.
By default, propagation occurs automatically in the Process class when a call to either of the SetOutputCube methods is invoked. If the program * requires no propagation then utilize this method. This method can be invoked between successive calls of SetOutputCube so that some cube will have labels propagated while others will not.
prop | Flag indicating if labels are be propagated to output cubes. |
Definition at line 555 of file Process.cpp.
Referenced by Isis::ProcessMapMosaic::RingsSetOutputCube(), and Isis::ProcessMapMosaic::SetOutputCube().
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inherited |
This method allows the programmer to propagate labels from a specific secondary cube.
cube | IString containing the name of the cube containing the labels to propagate. |
Definition at line 566 of file Process.cpp.
References Isis::PvlObject::addGroup(), Isis::PvlObject::addObject(), Isis::PvlObject::findObject(), Isis::PvlObject::group(), Isis::PvlObject::groups(), and Isis::PvlObject::hasObject().
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inherited |
This method allows the programmer to propagate original labels to the output cube (default is true)
prop | Flag indicating if original labels is to be propagated to output cubes. |
Definition at line 662 of file Process.cpp.
Referenced by Isis::ProcessMapMosaic::RingsSetOutputCube(), and Isis::ProcessMapMosaic::SetOutputCube().
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inherited |
This method allows the programmer to propagate input blobs to the output cube (default is true)
prop | Flag indicating if input blobs are to be propagated to output cubes. |
Definition at line 641 of file Process.cpp.
Referenced by Isis::ProcessMapMosaic::RingsSetOutputCube(), and Isis::ProcessMapMosaic::SetOutputCube().
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inherited |
This method allows the programmer to propagate input tables to the output cube (default is true)
prop | Flag indicating if input tables are to be propagated to output cubes. |
Definition at line 594 of file Process.cpp.
Referenced by Isis::ProcessMapMosaic::RingsSetOutputCube(), and Isis::ProcessMapMosaic::SetOutputCube().
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inherited |
Propagate the tables from the cube with the given filename to the output cube.
This is done at the time this method is called, not during normal processing. The names of the tables to propagate can be provided through the second paramter, by specifing a list of table names. Not providing any list (or providing an empty list) will propagate all tables.
fromName | QString of the name of the cube containing the tables to propagate. |
tableNames | List of QStrings of the names of the tables to propagate; default is empty, which indicates that all tables will be propagated. |
Definition at line 614 of file Process.cpp.
References Isis::Cube::label(), Isis::PvlObject::object(), Isis::PvlObject::objects(), Isis::Cube::open(), and Isis::Cube::read().
void Isis::ProcessExportPds4::reorder | ( | ) |
This method reorders the existing m_domDoc to follow PDS4 standards and fixes time formatting if needed.
Definition at line 296 of file ProcessExportPds4.cpp.
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inherited |
Set m_canGenerateChecksum which determines if we can generate a MD5 checksum on the image data.
flag | boolean to generate the checksum or not |
Definition at line 683 of file ProcessExport.cpp.
References Isis::ProcessExport::m_canGenerateChecksum.
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inlineinherited |
Sets the storage order of the output file.
Definition at line 183 of file ProcessExport.h.
References Isis::ProcessExport::p_format.
Referenced by Isis::ImageExporter::initializeProcess(), and Isis::ProcessExport::ProcessExport().
void Isis::ProcessExportPds4::setImageType | ( | ImageType | imageType | ) |
Create a standard PDS4 image label from the input cube.
Definition at line 106 of file ProcessExportPds4.cpp.
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virtualinherited |
Opens an input cube specified by the user and verifies requirements are met.
parameter | User parameter to obtain file to open. Typically, the value is "FROM". For example, the user can specify on the command line FROM=myfile.cub and this method will attempt to open the cube "myfile.cub" if the parameter was set to "FROM". |
requirements | Use to specify requirements for the input file. The following are requirments are checked against 1) ic_base::SizeMatch checks to make sure the input cube has the same bands, samples, and lines as the first input cube open using this method, 2) ic_base::SpatialMatch checks to make sure the input cube has the same samples and lines as the first input cube, 3) ic_base::Georeferenced checks to make sure latitude/longitudes can be obtained from the input cube, 4) ic_base::FullyGeoreferenced checks to make sure latitude/longitude, phase/incidence/emission, and other geometric parameters can be obtained from the input cube, 5) ic_base::OneBand checks to make sure the input cube has exactly one band. Note, that these requirements can be logically or'ed. For example, ic_base::SpatialMatch | ic_base::georeferenced. Defaults to 0 |
Isis::iException::Message |
Reimplemented in Isis::ProcessByLine, Isis::ProcessByBrick, Isis::ProcessBySpectra, and Isis::ProcessBySample.
Definition at line 243 of file Process.cpp.
Referenced by Isis::ImageExporter::addChannel(), Isis::JigsawRunWidget::on_JigsawAcceptButton_clicked(), Isis::FileTool::saveAsEnlargedCube(), and Isis::ProcessGroundPolygons::SetStatCubes().
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virtualinherited |
Opens an input cube specified by the programmer and verifies requirements are met.
fname | Programmer specified work file. For example, "myfile.cub". |
att | The cube attributes to use when opening the input cube. |
requirements | Same as requirements on SetInputCube. See that method for more details. Defaults to 0 |
Isis::iException::Message |
Reimplemented in Isis::ProcessByBrick.
Definition at line 82 of file Process.cpp.
References _FILEINFO_, Isis::Cube::bandCount(), Isis::CubeAttributeInput::bands(), Isis::Cube::lineCount(), Isis::Cube::open(), Isis::Cube::sampleCount(), and Isis::Cube::setVirtualBands().
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virtualinherited |
Set the InputCube vector to an opened Cube which was dynamically allocated.
This is used if there already exists a valid opened cube
inCube | - Pointer to input Cube |
Reimplemented in Isis::ProcessByLine.
Definition at line 201 of file Process.cpp.
References _FILEINFO_, and Isis::Cube::isOpen().
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inherited |
Set input pixel range from user.
This method performs the same function as SetInputRange(min,max) and SetInputRange(min,mid,max). However, the information for min/mid/max is obtained from the user via the command line. Therefore you must include the following parameter group in your application XML file:
Definition at line 374 of file ProcessExport.cpp.
References IsisAml::Clear(), IsisAml::GetDouble(), IsisAml::GetString(), Isis::Application::GetUserInterface(), Isis::Process::InputCubes, Isis::Histogram::Median(), Isis::ProcessExport::p_inputMaximum, Isis::ProcessExport::p_inputMiddle, Isis::ProcessExport::p_inputMinimum, Isis::Histogram::Percent(), and IsisAml::PutDouble().
Referenced by Isis::ImageExporter::addChannel(), Isis::ProcessExport::SetInputRange(), and Isis::ImageExporter::write().
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inherited |
Set input pixel range from to a linear stretch.
This method allows the programmer to define what range of input pixels in the input cube get mapped to the output range in the Buffer. By default the output range is 0.0 to 1.0 (can be overridden using the SetOutputRange method). This version of SetInputRange allows the programmer to perform a simple linear stretch. That is, "minimum:0.0 maximum:1.0" or minimum is mapped to 0.0, maximum is mapped to 1.0 everything inbetween is mapped linearly (e.g., (minimum+maximum)/2.0:0.5). Also, everything less than the minimum is mapped to 0.0 and everything more than the maximum is mapped to 1.0. If you are uncertain about how stretches operate see the Stretch object. If the input range is never set, no stretch will occur.
minimum | Minimum pixel value in the input cube to be mapped to the minimum value in the Buffer |
maximum | Maximum pixel value in the input cube to be mapped to the maximum value in the Buffer |
Isis::iException::Message |
Definition at line 108 of file ProcessExport.cpp.
References Isis::ProcessExport::SetInputRange().
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inherited |
Set input pixel range from to a linear stretch.
This method allows the programmer to define what range of input pixels in the input cube get mapped to the output range in the Buffer. By default the output range is 0.0 to 1.0 (can be overridden using the SetOutputRange method). This version of SetInputRange allows the programmer to perform a simple linear stretch. That is, "minimum:0.0 maximum:1.0" or minimum is mapped to 0.0, maximum is mapped to 1.0 everything inbetween is mapped linearly (e.g., (minimum+maximum)/2.0:0.5). Also, everything less than the minimum is mapped to 0.0 and everything more than the maximum is mapped to 1.0. If you are uncertain about how stretches operate see the Stretch object. If the input range is never set, no stretch will occur.
minimum | Minimum pixel value in the input cube to be mapped to the minimum value in the Buffer |
maximum | Maximum pixel value in the input cube to be mapped to the maximum value in the Buffer |
index | The index of the channel you are setting |
Isis::iException::Message |
Definition at line 137 of file ProcessExport.cpp.
References Isis::ProcessExport::SetInputRange().
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inherited |
Set input pixel range from to a piecewise linear stretch.
This method allows the programmer to define what range of input pixels in the input cube get mapped to the output range in the Buffer. By default the output range is 0.0 to 1.0 (can be overridden using the SetOutputRange method). This version of SetInputRange allows the programmer to perform a piecewise linear stretch. That is,"minimum:0.0 middle:0.5 maximum:1.0". The pixels from the input cube between minimum and middle are mapped to 0.0 and 0.5 linearly, while pixels between middle and maximum are mapped to 0.5 and 1.0 linearly. Those outside the range of minimum and maximum are mapped to 0.0 and 1.0 respectively. If you are uncertain about how stretches operate see the Stretch object. If the input range is never set, no stretch will occur.
minimum | Minimum pixel value in the input cube to be mapped to the minimum value in the Buffer |
middle | Middle pixel value in the input cube to be mapped to the (minimum+maximum)/2.0 value in the Buffer |
maximum | Maximum pixel value in the input cube to be mapped to the maximum value in the Buffer |
Isis::IException::Message |
Definition at line 168 of file ProcessExport.cpp.
References _FILEINFO_, Isis::Process::InputCubes, Isis::ProcessExport::p_inputMaximum, Isis::ProcessExport::p_inputMiddle, Isis::ProcessExport::p_inputMinimum, and Isis::IException::Programmer.
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inherited |
Set input pixel range from to a piecewise linear stretch.
This method allows the programmer to define what range of input pixels in the input cube get mapped to the output range in the Buffer. By default the output range is 0.0 to 1.0 (can be overridden using the SetOutputRange method). This version of SetInputRange allows the programmer to perform a piecewise linear stretch. That is,"minimum:0.0 middle:0.5 maximum:1.0". The pixels from the input cube between minimum and middle are mapped to 0.0 and 0.5 linearly, while pixels between middle and maximum are mapped to 0.5 and 1.0 linearly. Those outside the range of minimum and maximum are mapped to 0.0 and 1.0 respectively. If you are uncertain about how stretches operate see the Stretch object. If the input range is never set, no stretch will occur.
minimum | Minimum pixel value in the input cube to be mapped to the minimum value in the Buffer |
middle | Middle pixel value in the input cube to be mapped to the (minimum+maximum)/2.0 value in the Buffer |
maximum | Maximum pixel value in the input cube to be mapped to the maximum value in the Buffer |
index | The index of the channel you are setting |
Isis::iException::Message |
Definition at line 216 of file ProcessExport.cpp.
References _FILEINFO_, Isis::Process::InputCubes, Isis::ProcessExport::p_inputMaximum, Isis::ProcessExport::p_inputMiddle, Isis::ProcessExport::p_inputMinimum, and Isis::IException::Programmer.
void Isis::ProcessExportPds4::setLogicalId | ( | QString | lid | ) |
Allows mission specific programs to set logical_identifier required for PDS4 labels.
This value is added to the xml file by the identificationArea() method.
The input value will be converted to all-lowercase if not already in line with PDS4 requirements.
The input string should be colon separated string with 6 identifiers:
Example: urn:esa:psa:em16_tgo_frd:data_raw:frd_raw_sc_d_20150625T133700-20150625T135700
lid | The logical identifier value required for PDS4 compliant labels. |
Definition at line 413 of file ProcessExportPds4.cpp.
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virtualinherited |
Allocates a user-specified output cube whose size matches the first input cube.
parameter | User specified output file. For example, "TO" is a popular user parameter. If the user specified TO=output.cub, then this routine would allocate the file output.cub with size specified by the first opened input cube. The output pixel type will be propagated from the first loaded input cube or will use the value in the application XML file for pixelType. |
Isis::iException::Message |
Reimplemented in Isis::ProcessMosaic, Isis::ProcessImport, and Isis::ProcessMapMosaic.
Definition at line 266 of file Process.cpp.
References _FILEINFO_.
Referenced by Isis::FileTool::saveAsEnlargedCube(), and Isis::ProcessImport::SetOutputCube().
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virtualinherited |
Allocates a user specified output cube whose size is specified by the programmer.
parameter | User specified output file. For example, "TO" is a popular user parameter. If the user specified TO=output.cub, then this routine would allocate the file output.cub with size specified by the first opened input cube. The output pixel type will be propagated from the first loaded input cube or will use the value in the application XML file for pixelType. |
ns | Number of samples to allocate |
nl | Number of lines to allocate |
nb | Number of bands to allocate |
Isis::iException::Message |
Definition at line 302 of file Process.cpp.
References _FILEINFO_.
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virtualinherited |
Allocates a output cube whose name and size is specified by the programmer.
fname | Name of the output cube to allocate |
att | The cube attributes to use when creating the output cube. |
ns | Number of samples to allocate |
nl | Number of lines to allocate |
nb | Number of bands to allocate |
Isis::iException::Message |
Definition at line 334 of file Process.cpp.
References _FILEINFO_, Isis::PvlObject::addGroup(), Isis::PvlObject::addObject(), Isis::AttachedLabel, Isis::CubeAttributeOutput::byteOrder(), Isis::Cube::create(), Isis::CubeAttributeOutput::fileFormat(), Isis::PvlObject::findObject(), Isis::PvlObject::group(), Isis::PvlObject::groups(), Isis::PvlContainer::isNamed(), Isis::Cube::label(), Isis::Cube::labelSize(), Isis::CubeAttributeOutput::maximum(), Isis::CubeAttributeOutput::minimum(), Isis::PvlContainer::name(), Isis::PvlObject::object(), Isis::PvlObject::objects(), Isis::Cube::pixelType(), Isis::CubeAttributeOutput::pixelType(), Isis::CubeAttributeOutput::propagateMinimumMaximum(), Isis::CubeAttributeOutput::propagatePixelType(), Isis::Cube::setBaseMultiplier(), Isis::Cube::setByteOrder(), Isis::Cube::setDimensions(), Isis::Cube::setFormat(), Isis::Cube::setLabelsAttached(), Isis::Cube::setLabelSize(), Isis::Cube::setMinMax(), Isis::Cube::setPixelType(), and Isis::Cube::write().
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inherited |
Set byte endianness of the output cube.
This method allows the programmer to specify whether the first byte of data output from the ProcessExport will be the most significant byte or the least significant byte. If the user does not explicitly set the endianness, it will default to that of the current system architecture
byteOrderIn | enumeration of the endianness (MSB or LSB) |
Definition at line 659 of file ProcessExport.cpp.
References Isis::ProcessExport::p_endianSwap, and Isis::ProcessExport::p_endianType.
Referenced by Isis::ProcessExport::ProcessExport().
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inherited |
Set output special pixel value for HIS.
Sets the value for output special pixel HISs. HIS pixels values from the input cube will be set to this value. Be default this value will be set to the maximum out value set with SetOutputRange
value | The output pixel value for all HIS pixels |
Definition at line 531 of file ProcessExport.cpp.
References Isis::ProcessExport::p_His, and Isis::ProcessExport::p_His_Set.
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inherited |
Set output special pixel value for HRS.
Sets the value for output special pixel HRSs. HRS pixels values from the input cube will be set to this value. Be default this value will be set to the maximum out value set with SetOutputRange
value | The output pixel value for all HRS pixels |
Definition at line 546 of file ProcessExport.cpp.
References Isis::ProcessExport::p_Hrs, and Isis::ProcessExport::p_Hrs_Set.
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inherited |
Set output special pixel value for LIS.
Sets the value for output special pixel LISs. LIS pixels values from the input cube will be set to this value. Be default this value will be set to the minimum out value set with SetOutputRange
value | The output pixel value for all LIS pixels |
Definition at line 501 of file ProcessExport.cpp.
References Isis::ProcessExport::p_Lis, and Isis::ProcessExport::p_Lis_Set.
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inherited |
Set output special pixel value for LRS.
Sets the value for output special pixel LRSs. LRS8 pixels values from the input cube will be set to this value. Be default this value will be set to the minimum out value set with SetOutputRange
value | The output pixel value for all LRS pixels |
Definition at line 516 of file ProcessExport.cpp.
References Isis::ProcessExport::p_Lrs, and Isis::ProcessExport::p_Lrs_Set.
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inherited |
Set output special pixel value for NULL.
Sets the value for output special pixel NULLs. NULL pixels values from the input cube will be set to this value. Be default this value will be set to the minimum out value set with SetOutputRange
value | The output pixel value for all NULL pixels |
Definition at line 486 of file ProcessExport.cpp.
References Isis::ProcessExport::p_Null, and Isis::ProcessExport::p_Null_Set.
Referenced by Isis::ImageExporter::initializeProcess().
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inherited |
Set output pixel range in Buffer.
This method allows the programmer to specify the acceptable range of values contained in the Buffer. If this method is never invoked, all pixel values received in the Buffer of the export function will be in the range of 0.0 to 1.0. However, this can be overridden, for example, to 0.0 and 255.0, by invoking this method.
minimum | Desired minimum pixel value in the Buffer |
maximum | Desired maximum pixel value in the Buffer |
Isis::iException::Message |
Definition at line 464 of file ProcessExport.cpp.
References _FILEINFO_, Isis::ProcessExport::p_outputMaximum, Isis::ProcessExport::p_outputMiddle, Isis::ProcessExport::p_outputMinimum, and Isis::IException::Programmer.
Referenced by Isis::ImageExporter::initializeProcess(), and Isis::ProcessExport::SetOutputType().
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inherited |
Set output pixel bit type in Buffer.
This method specifies the type of pixel data that is going to be output. Essentially, it is a convenience method that will automatically calculate the necessary output range based on the minimum and maximum values of the bit type that is specified. Currently, the method only supported data types are Isis::UnsignedByte (Range of 0 to 255), Isis::SignedWord (Range of -32768 to 32767), Isis::UnsignedWord (Range of 0 to 65535), and Isis::Real (Range from the minimum floating-point value to the maximum floating-point value supported in C++; -FLT_MAX to FLT_MAX), since these are the only formats that can be output by ProcessExport. If neither this method nor the SetOutputRange method is invoked, all pixel values received in the Buffer of the export function will be in the range of 0.0 to 1.0.
NOTE: You must set the format type of the output data with SetFormat before calling this method. Otherwise, you will get an error.
pixelIn | this is an enumeration of the different pixel types. The only values that are recognized as valid are Isis::UnsignedByte, Isis::SignedWord, Isis::UnsignedWord, and Isis::Real. |
Isis::iException::Message |
Definition at line 618 of file ProcessExport.cpp.
References _FILEINFO_, Isis::ProcessExport::JP2, Isis::ProcessExport::p_format, Isis::ProcessExport::p_pixelType, Isis::IException::Programmer, and Isis::ProcessExport::SetOutputRange().
Referenced by Isis::ImageExporter::initializeProcess(), and Isis::ProcessExport::ProcessExport().
void Isis::ProcessExportPds4::setPixelDescription | ( | QString | description | ) |
Sets the description string which describes the pixel vales in File_Area_Observational.
description | Description of pixel values to use. |
Definition at line 799 of file ProcessExportPds4.cpp.
void Isis::ProcessExportPds4::setSchemaLocation | ( | QString | schema | ) |
Allows mission specific programs to use specified versions of dictionaries.
schema | The string of schema to be set. |
Definition at line 459 of file ProcessExportPds4.cpp.
void Isis::ProcessExportPds4::setTitle | ( | QString | title | ) |
Allows mission specific programs to set the title required for PDS4 labels.
This value is added to the xml file by the identificationArea() method.
title | The title value required for PDS4 compliant labels. |
Definition at line 446 of file ProcessExportPds4.cpp.
void Isis::ProcessExportPds4::setVersionId | ( | QString | versionId | ) |
Allows mission specific programs to set version_id required for PDS4 labels.
This value is added to the xml file by the identificationArea() method.
The input string should be colon separated string with 6 identifiers:
versiondId | The version_id value required for PDS4 compliant labels. |
Definition at line 431 of file ProcessExportPds4.cpp.
void Isis::ProcessExportPds4::StandardAllMapping | ( | ) |
Create the standard keywords for the IMAGE_MAP_PROJECTION group in a PDS label.
IException::User | "Unable to export projection [" + projName + "] to PDS4 product. " + "This projection is not supported in ISIS3." |
Definition at line 1170 of file ProcessExportPds4.cpp.
References _FILEINFO_, Isis::PvlToXmlTranslationManager::Auto(), Isis::PvlObject::findGroup(), Isis::PvlContainer::findKeyword(), Isis::PvlObject::findObject(), Isis::PvlObject::hasObject(), Isis::Projection::Name(), Isis::toDouble(), and Isis::toString().
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protected |
Export bandbin group to sp:Spectral Characteristics.
Definition at line 546 of file ProcessExportPds4.cpp.
References Isis::PvlObject::findObject().
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protected |
This method translates the information from the ISIS Instrument group to the PDS4 labels.
Definition at line 203 of file ProcessExportPds4.cpp.
References _FILEINFO_, Isis::PvlToXmlTranslationManager::Auto(), Isis::FileName::expanded(), and Isis::PvlObject::findObject().
QDomDocument & Isis::ProcessExportPds4::StandardPds4Label | ( | ) |
Create a standard PDS4 image label from the input cube.
Definition at line 94 of file ProcessExportPds4.cpp.
void Isis::ProcessExport::StartProcess |
This method invokes the process operation over a single input cube.
In the cases of BSQ and BIL this is a process by line. In the case of BIP, this is a process by band. A single buffer of input data will be padd to the buffer processing function. Note the data will be stretched based on the invocations of the SetInputRange and SetpOutputRange methods.
funct | (Isis::Buffer &b) Name of your buffer processing function. The buffer in will contain stretched input cube pixels for an entire buffer. These pixels must be written to the foreign output file (e.g, jpg, tif, etc). |
Definition at line 800 of file ProcessExport.cpp.
void Isis::ProcessExport::StartProcess |
Write an entire cube to an output file stream.
Just as with the other invocation of the StartProcess method, this will process an input cube buffer by buffer. Unlike the other invocation, this method takes care of writing the input data to an output file stream specified by the user instead of relying on an external function.
&fout | An open stream to which the pixel data will be written. After calling this method once, the stream will contain all of the pixel data from the input cube. |
Definition at line 1027 of file ProcessExport.cpp.
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virtual |
This method fills the image data of the PDS4 file using the parent class ProcessExport::StartProcess.
[out] | fout | Output file stream to be filled with the PDS4 data. |
Reimplemented from Isis::ProcessExport.
Definition at line 1084 of file ProcessExportPds4.cpp.
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virtualinherited |
This method invokes the process operation over a single input cube.
In the cases of BSQ and BIL this is a process by line. In the case of BIP, this is a process by band. A single buffer of input data will be padd to the buffer processing function. Note the data will be stretched based on the invocations of the SetInputRange and SetpOutputRange methods.
funct | (Isis::Buffer &b) Name of your buffer processing function. The buffer in will contain stretched input cube pixels for an entire buffer. These pixels must be written to the foreign output file (e.g, jpg, tif, etc). |
Definition at line 800 of file ProcessExport.cpp.
References _FILEINFO_, Isis::BufferManager::begin(), Isis::ProcessExport::BIL, Isis::ProcessExport::BIP, Isis::ProcessExport::BSQ, Isis::Progress::CheckStatus(), Isis::BufferManager::end(), Isis::ProcessExport::InitProcess(), Isis::Process::InputCubes, Isis::ProcessExport::JP2, Isis::BufferManager::next(), Isis::ProcessExport::p_format, Isis::Process::p_progress, Isis::ProcessExport::p_str, Isis::IException::Programmer, and Isis::Buffer::size().
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inlinevirtualinherited |
In the base class, this method will invoked a user-specified function exactly one time.
In derived classes such as ProcessByLine, the StartProcess will invoke a user-specified function for every line in a cube.
funct() | Name of your processing function |
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Export BandBin group for 2D or 3D Image format.
Definition at line 578 of file ProcessExportPds4.cpp.
References Isis::PvlToXmlTranslationManager::Auto(), and Isis::FileName::expanded().
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Export BandBin group for non-uniformly spaced 3D Spectral data format.
Definition at line 732 of file ProcessExportPds4.cpp.
References _FILEINFO_, Isis::PvlToXmlTranslationManager::Auto(), Isis::FileName::expanded(), Isis::PvlObject::findObject(), Isis::PvlContainer::hasKeyword(), and Isis::PvlKeyword::size().
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Export BandBin group for uniformly spaced 3D Spectral data format.
Definition at line 590 of file ProcessExportPds4.cpp.
References _FILEINFO_, Isis::PvlToXmlTranslationManager::Auto(), Isis::FileName::expanded(), Isis::PvlObject::findObject(), Isis::PvlContainer::hasKeyword(), Isis::PvlKeyword::size(), Isis::toString(), and Isis::PvlKeyword::unit().
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Recursive method that will translate the "unit" attribute of any child elements of a given element.
Returns void if the given element has no children.
parent | The element whose children's units will be translated. This method will be recursively called on all child elements. |
transMap | The translation map with lowercase ISIS units as keys and PDS4 units as values. |
Definition at line 1551 of file ProcessExportPds4.cpp.
References _FILEINFO_.
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This function will go through an XML document and attempt to convert all "units" attributes to the appropriate PDS4 units format.
This method uses a pvl config file to determine what the proper PDS4 format is and what potential input formats are. The file is converted to a map which is then used to convert all of the input units. See $base/translations/pds4ExportUnits.pvl for more information on this file.
This method is automatically called in StandardPds4Label(), but may need to be called again if the label is changed afterwards.
[in,out] | label | A reference to the label that the units will be translated in. |
transMapFile | The path to the config file that will be used to determine unit translations. |
Definition at line 1470 of file ProcessExportPds4.cpp.
References _FILEINFO_, and Isis::Pvl::read().
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Writes out the History blob to the cube.
Definition at line 703 of file Process.cpp.
References Isis::History::AddEntry(), Isis::PvlContainer::isNamed(), Isis::PvlObject::object(), Isis::PvlObject::objects(), and Isis::Cube::write().
Referenced by Isis::ImageImporter::import().
void Isis::ProcessExportPds4::WritePds4 | ( | QString | outFile | ) |
This method write out the labels and image data to the specified output file.
Creates an IMG and XML file.
outFile | QString of the name of the output image file. Will create an XML and an IMG file with the output file name. |
Definition at line 1116 of file ProcessExportPds4.cpp.
References Isis::FileName::baseName(), Isis::FileName::expanded(), Isis::FileName::extension(), Isis::FileName::name(), and Isis::FileName::originalPath().
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A vector of pointers to opened Cube objects.
The pointers are established in the SetInputCube/SetInputWorkCube methods.
Definition at line 200 of file Process.h.
Referenced by Isis::ProcessExport::CreateWorldFile(), Isis::ProcessExport::GetBuffersBIL(), Isis::ProcessExport::GetBuffersBIP(), Isis::ProcessExport::GetBuffersBSQ(), Isis::ProcessExport::InitProcess(), Isis::ProcessByBrick::ProcessCube(), Isis::ProcessByBrick::ProcessCubes(), Isis::ProcessExport::SetInputRange(), Isis::ProcessByQuickFilter::StartProcess(), and Isis::ProcessExport::StartProcess().
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protectedinherited |
Flag to determine if a file checksum will be generated.
Definition at line 283 of file ProcessExport.h.
Referenced by Isis::ProcessExport::canGenerateChecksum(), Isis::ProcessExport::checksum(), Isis::ProcessExport::ProcessExport(), Isis::ProcessExport::setCanGenerateChecksum(), and Isis::ProcessExport::StartProcess().
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A cryptographic hash that will generate an MD5 checksum of the image data.
Definition at line 281 of file ProcessExport.h.
Referenced by Isis::ProcessExport::checksum(), Isis::ProcessExport::ProcessExport(), Isis::ProcessExport::StartProcess(), and Isis::ProcessExport::~ProcessExport().
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XML label.
Definition at line 141 of file ProcessExportPds4.h.
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Type of image data to be written.
Definition at line 146 of file ProcessExportPds4.h.
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QString with specified logical identifier.
Definition at line 143 of file ProcessExportPds4.h.
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Description of pixel values.
Definition at line 147 of file ProcessExportPds4.h.
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QString with all schema locations required.
Definition at line 142 of file ProcessExportPds4.h.
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QString with specified title.
Definition at line 145 of file ProcessExportPds4.h.
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QString with specified version id.
Definition at line 144 of file ProcessExportPds4.h.
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A vector of pointers to allocated Cube objects.
The pointers are established in the SetOutputCube method.
Definition at line 206 of file Process.h.
Referenced by Isis::ProcessImport::ProcessBil(), Isis::ProcessImport::ProcessBip(), Isis::ProcessImport::ProcessBsq(), Isis::ProcessByBrick::ProcessCube(), Isis::ProcessByBrick::ProcessCubes(), Isis::ProcessImport::ProcessJp2(), and Isis::ProcessByQuickFilter::StartProcess().
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Holds the calculated statistics for each band separately of every input cubei after the CalculateStatistics method is called.
Definition at line 187 of file Process.h.
Referenced by Isis::Process::BandStatistics().
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Holds the calculated statistics for every band together of every input cubei after the CalculateStatistics method is called.
Definition at line 194 of file Process.h.
Referenced by Isis::Process::CubeStatistics().
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Object to swap the endianness of the raw output to either MSB or LSB.
Definition at line 250 of file ProcessExport.h.
Referenced by Isis::ProcessExport::isisOut16s(), Isis::ProcessExport::isisOut16u(), Isis::ProcessExport::isisOut32(), Isis::ProcessExport::ProcessExport(), Isis::ProcessExport::SetOutputEndian(), and Isis::ProcessExport::~ProcessExport().
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The byte order of the output file.
Definition at line 252 of file ProcessExport.h.
Referenced by Isis::ProcessExport::SetOutputEndian().
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Current storage order.
Definition at line 228 of file ProcessExport.h.
Referenced by Isis::ProcessExport::InitProcess(), Isis::ProcessExport::setFormat(), Isis::ProcessExport::SetOutputType(), and Isis::ProcessExport::StartProcess().
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The output value for pixels whose input DNs are High Instrument Saturation values.
Definition at line 265 of file ProcessExport.h.
Referenced by Isis::ProcessExport::OutputHis(), and Isis::ProcessExport::SetOutputHis().
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Indicates whether p_His has been set (i.e.
if setHis() has been called).
Definition at line 276 of file ProcessExport.h.
Referenced by Isis::ProcessExport::OutputHis(), Isis::ProcessExport::ProcessExport(), and Isis::ProcessExport::SetOutputHis().
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The output value for pixels whose input DNs are High Representation Saturation values.
Definition at line 267 of file ProcessExport.h.
Referenced by Isis::ProcessExport::OutputHrs(), and Isis::ProcessExport::SetOutputHrs().
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protectedinherited |
Indicates whether p_Hrs has been set (i.e.
if setHrs() has been called).
Definition at line 278 of file ProcessExport.h.
Referenced by Isis::ProcessExport::OutputHrs(), Isis::ProcessExport::ProcessExport(), and Isis::ProcessExport::SetOutputHrs().
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Maximum pixel value in the input cube to be mapped to the maximum value in the Buffer.
Definition at line 247 of file ProcessExport.h.
Referenced by Isis::ProcessExport::GetInputMaximum(), Isis::ProcessExport::InitProcess(), Isis::ProcessExport::ProcessExport(), and Isis::ProcessExport::SetInputRange().
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Middle pixel value in the input cube to be mapped to the (minimum+maximum)/2.0 value in the Buffer.
Definition at line 243 of file ProcessExport.h.
Referenced by Isis::ProcessExport::InitProcess(), Isis::ProcessExport::ProcessExport(), and Isis::ProcessExport::SetInputRange().
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Minimum pixel value in the input cube to be mapped to the minimum value in the Buffer.
Definition at line 240 of file ProcessExport.h.
Referenced by Isis::ProcessExport::GetInputMinimum(), Isis::ProcessExport::InitProcess(), Isis::ProcessExport::ProcessExport(), and Isis::ProcessExport::SetInputRange().
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The output value for pixels whose input DNs are Low Instrument Saturation values.
Definition at line 261 of file ProcessExport.h.
Referenced by Isis::ProcessExport::OutputLis(), and Isis::ProcessExport::SetOutputLis().
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Indicates whether p_Lis has been set (i.e.
if setLis() has been called).
Definition at line 272 of file ProcessExport.h.
Referenced by Isis::ProcessExport::OutputLis(), Isis::ProcessExport::ProcessExport(), and Isis::ProcessExport::SetOutputLis().
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The output value for pixels whose input DNs are Low Representation Saturation values.
Definition at line 263 of file ProcessExport.h.
Referenced by Isis::ProcessExport::OutputLrs(), and Isis::ProcessExport::SetOutputLrs().
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protectedinherited |
Indicates whether p_Lrs has been set (i.e.
if setLrs() has been called).
Definition at line 274 of file ProcessExport.h.
Referenced by Isis::ProcessExport::OutputLrs(), Isis::ProcessExport::ProcessExport(), and Isis::ProcessExport::SetOutputLrs().
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The output value for pixels whose input DNs are Null values.
Definition at line 260 of file ProcessExport.h.
Referenced by Isis::ProcessExport::OutputNull(), and Isis::ProcessExport::SetOutputNull().
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Indicates whether p_Null has been set (i.e.
if setNull() has been called).
Definition at line 270 of file ProcessExport.h.
Referenced by Isis::ProcessExport::OutputNull(), Isis::ProcessExport::ProcessExport(), and Isis::ProcessExport::SetOutputNull().
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Desired maximum pixel value in the Buffer.
Definition at line 238 of file ProcessExport.h.
Referenced by Isis::ProcessExport::GetOutputMaximum(), Isis::ProcessExport::InitProcess(), Isis::ProcessExport::OutputHis(), Isis::ProcessExport::OutputHrs(), Isis::ProcessExport::ProcessExport(), and Isis::ProcessExport::SetOutputRange().
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Middle pixel value (minimum+maximun)/2.0 in the Buffer.
Definition at line 236 of file ProcessExport.h.
Referenced by Isis::ProcessExport::InitProcess(), Isis::ProcessExport::ProcessExport(), and Isis::ProcessExport::SetOutputRange().
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Desired minimum pixel value in the Buffer.
Definition at line 235 of file ProcessExport.h.
Referenced by Isis::ProcessExport::GetOutputMinimum(), Isis::ProcessExport::InitProcess(), Isis::ProcessExport::OutputLis(), Isis::ProcessExport::OutputLrs(), Isis::ProcessExport::OutputNull(), Isis::ProcessExport::ProcessExport(), and Isis::ProcessExport::SetOutputRange().
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The bits per pixel of the output image.
Definition at line 254 of file ProcessExport.h.
Referenced by Isis::ProcessExport::SetOutputType(), and Isis::ProcessExport::StartProcess().
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Pointer to a Progress object.
Definition at line 160 of file Process.h.
Referenced by Isis::ProcessExport::InitProcess(), Isis::ProcessImport::ProcessBil(), Isis::ProcessImport::ProcessBip(), Isis::ProcessImport::ProcessBsq(), Isis::ProcessExport::ProcessExport(), Isis::ProcessImport::ProcessImport(), Isis::ProcessImport::ProcessJp2(), Isis::Process::Progress(), Isis::ProcessByBrick::RunProcess(), Isis::ProcessByQuickFilter::StartProcess(), and Isis::ProcessExport::StartProcess().
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protectedinherited |
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protectedinherited |
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protectedinherited |
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protectedinherited |
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protectedinherited |
Stretch object to ensure a reasonable range of pixel values in the output data.
Definition at line 256 of file ProcessExport.h.
Referenced by Isis::ProcessExport::InitProcess(), Isis::ProcessExport::StartProcess(), and Isis::ProcessExport::~ProcessExport().