| appjit | 
    Apply sample/line jitter offsets to the camera pointing of an observation
    set
   
 | 
| cam2cam | 
    Convert camera image to a different camera image
   
 | 
| cam2map | 
    Convert camera image to a map projection
   
 | 
| camdev | 
    Creates photometric and geometric information bands for an image cube
   
 | 
| caminfo | 
    Outputs a PVL file that contains camera information.
   
 | 
| campt | 
    Computes geometric and photometric information at a given pixel location
   
 | 
| camrange | 
    Compute the lat/lon range of a camera image
   
 | 
| camstats | 
    Generates and outputs camera statistics for a cube in raw camera geometry
   
 | 
| camtrim | 
    Trims pixels outside of lat/lon range
   
 | 
| csminit | 
    Attach a CSM model state to a cube.
   
 | 
| noproj | 
    Removes camera distortions in a raw level 1 cube creating an ideal version of the cube.
   
 | 
| phocube | 
    Create photometric and geometric information bands for an image cube
   
 | 
| phohillier | 
    Apply Hillier photometric correction to multiband cubes
   
 | 
| photomet | 
    Perform photometric corrections on a cube
   
 | 
| photrim | 
    Trims pixels outside of phase, incidence, and emission angles
   
 | 
| pixel2map | 
    Convert camera image to a map projection using a forward driven algorithm
   
 | 
| ringscam2map | 
    Convert camera image to a map projection
   
 | 
| ringspt | 
    Outputs ring radius/longitude at line/sample or reverse for Cassini images of Saturn rings
   
 | 
| skymap | 
    Convert camera image to a skymap projection
   
 | 
| skypt | 
    Converts between sample/line and ra/ dec positions
   
 | 
| skyrange | 
    Compute the ra/dec range of a camera image
   
 | 
| spicefit | 
    Fit a function to camera pointing
   
 | 
| spiceinit | 
    Update SPICE data (kernels, pointing, and position) for a camera cube
   
 | 
| spiceserver | 
    Spiceinit Server
   
 | 
| autoseed | 
    Creates a control network for a list of images
   
 | 
| cnet2dem | 
     Create a digital elevation model from one or more control network files. 
   
 | 
| cnet2mat | 
    Converts an Isis control network file to an ISIS2 match point file.
   
 | 
| cnetadd | 
    Adds Level 1 or Level 2 images to an existing Isis Control Net file.
   
 | 
| cnetbin2pvl | 
    Converts an Isis control network file from binary into pvl format.
   
 | 
| cnetcheck | 
    Checks the validity of a control network
   
 | 
| cnetcombinept | 
    Combine one to many control networks with common control points.
   
 | 
| cnetedit | 
    Edit control networks
   
 | 
| cneteditor | 
    Interactive control network editor
   
 | 
| cnetextract | 
    Extracts portions of an existing Control Network
   
 | 
| cnetmerge | 
    Merges multiple Control Networks into one
   
 | 
| cnetnewradii | 
    Generate new radii from DEM for a ControlNet
   
 | 
| cnetpvl2bin | 
    Converts an Isis control network file from pvl format into binary.
   
 | 
| cnetref | 
    The application cnetref finds the best reference for a Control
    Point based on criteria like Emission Angle or Incidence Angle or
    Resolution or Interest 
   
 | 
| cnetsplit | 
    The application cnetsplit splits the input control network into user
    specified number of control networks.
   
 | 
| cnetstats | 
   The application cnetstats has the ability to generate statistics and apply 
   filters on a Control Network and outputs results in a specified output file 
   in CSV format. 
   
 | 
| cnettable | 
    Application to get Excel compatible statistics  
   
 | 
| cnetthinner | 
     Generate an updated control network with fewer points, with efficient spatial distributed across images. 
   
 | 
| cnetwinnow | 
    Sets problem measures to ignored based on an examination of the residual histogram.
   
 | 
| deltack | 
    Update camera pointing for a single image
   
 | 
| findfeatures | 
    Feature-based matching algorithms used to create ISIS control networks
   
 | 
| findimageoverlaps | 
    Uses the input image footprints to find their intersections and writes these
    intersections to a file for used in other programs such as autoseed.
   
 | 
| footprintinit | 
    Creates a lat/lon polygon and writes it to the image
   
 | 
| getsn | Prints Image Serial Number 
 | 
| ipce | 
      Integrated Photogrammetric Control Environment
     
 | 
| jigsaw | 
    Improves image alignment by updating camera geometry attached to cubes.
   
 | 
| m3loc2net | 
    Creates a control network containing ground points either using a Chandrayaan LOC file
    or the image camera for lat/lon/radii values.
   
 | 
| mat2cnet | 
    Converts an ISIS2 match point file to an ISIS control network file.
   
 | 
| overlapstats | Calculates the statistics of overlapping cube regions 
 | 
| pointreg | 
    Automatically register control measures to their point's reference
   
 | 
| qnet | 
    Create and edit control networks
   
 | 
| qtie | 
    Update camera pointing (SPICE) on a single cube
   
 | 
| seedgrid | 
    Creates a control network for a Lat/Lon range
   
 | 
| deriv | 
    Apply horizontal or vertical derivative
   
 | 
| divfilter | 
    Apply a spatial high pass filter to a cube (divide)
   
 | 
| dstripe | 
    Remove horizontal or vertical stripes/noise from a cube
   
 | 
| gauss | 
    Filter a cube through a kernel using Gaussian weight
   
 | 
| gradient | 
    Apply Sobel or Roberts gradient to a cube
   
 | 
| highpass | 
    Apply a spatial high pass filter to a cube
   
 | 
| interestcube | 
    Create interest cube
   
 | 
| kernfilter | 
    Filter a cube through a kernel
   
 | 
| kuwahara | 
    Filter a cube, smoothing but preserving edges
   
 | 
| lowpass | 
    Apply lowpass or blurring filter to a cube
   
 | 
| median | 
    Set pixels to median of surrounding pixel values
   
 | 
| minmax | 
    Apply a minimum or maximum filter to a cube
   
 | 
| mode | 
    Set pixels to mode of surrounding pixel values
   
 | 
| noisefilter | 
    Apply a noise removal filter to a cube
   
 | 
| sharpen | 
    Sharpen the features in a cube
   
 | 
| specdivfilter | 
    Apply a spectral division filter
   
 | 
| spechighpass | 
    Apply a spectral high pass filter to a cube
   
 | 
| speclowpass | 
    Apply spectral low pass filter to a cube
   
 | 
| svfilter | 
    Apply a variance or standard deviation filter to a cube
   
 | 
| trimfilter | 
    Apply a trim filter to a cube
   
 | 
| center | 
    Compute the center of mass of a single-band cube
   
 | 
| ckwriter | 
    Generate NAIF compatible SPICE CK kernels from ISIS cubes
   
 | 
| enlarge | 
    Enlarge the pixel dimensions of an image
   
 | 
| findrx | 
    Find and refine reseau points in a cube
   
 | 
| flip | 
    Flip a cube from top-to-bottom
   
 | 
| footprintmerge | 
    Find footprint islands, given a list of cubes
   
 | 
| framestitch | 
    Stitches even and odd frames from push frame cubes back into a single cube.
   
 | 
| mirror | 
    Flip a cube from left-to-right
   
 | 
| reduce | 
    Reduce the pixel dimensions of an image
   
 | 
| remrx | 
    Removes Reseaus from an image
   
 | 
| rotate | 
    Rotates a cube any number of degrees
   
 | 
| slither | 
      Computes a transformation to shift entire lines or samples
   
 | 
| spkwriter | 
    Generate NAIF compatible SPICE SPK kernels from ISIS cubes
   
 | 
| translate | 
    Translate an image by given sample and line translation values
   
 | 
| warp | 
      Warp an image using a Control Network
   
 | 
| ascii2isis | Import ascii file as a cube 
 | 
| blobdump | 
      Program to output a selected blob out to a file
   
 | 
| ckwriter | 
    Generate NAIF compatible SPICE CK kernels from ISIS cubes
   
 | 
| cnet2mat | 
    Converts an Isis control network file to an ISIS2 match point file.
   
 | 
| ddd2isis | 
    Import msss ddd file into Isis format
   
 | 
| dsk2isis | 
    Converts NAIF DSK plate model to ISIS format
   
 | 
| fits2isis | 
    Import fits files into Isis format
   
 | 
| hyb1pds4gen | 
    Convert Hayabusa1 image from from ISIS cube to PDS4 format
   
 | 
| isis2ascii |  Export cube to an ascii file 
 | 
| isis2fits | 
    Exports a cube to fits format
   
 | 
| isis2gml | 
    Convert ISIS cube to GML format
   
 | 
| isis2pds | 
    Convert from ISIS cube to PDS 3 or PDS 4 format
   
 | 
| isis2raw | 
    Exports a cube to raw format
   
 | 
| isis2std | 
    Exports a cube to PNG, BMP, TIFF, JPEG, or JPEG 2000
   
 | 
| isisexport | 
    Convert from ISIS cube to another format
   
 | 
| isisimport | 
    Convert from an external format, non-ISIS format using template files to an ISIS Cube.
   
 | 
| junocam2isis | Import PDS formatted JunoCam images into ISIS cube format 
 | 
| maplab | 
    Add Mapping group to the labels of a cube
   
 | 
| mat2cnet | 
    Converts an ISIS2 match point file to an ISIS control network file.
   
 | 
| pds2isis | Import PDS or ISIS2 image into ISIS cube format 
 | 
| raw2isis | 
    Import raw cube into Isis format
   
 | 
| rolo2isis | Import isis2 rolo image into isis  
 | 
| spkwriter | 
    Generate NAIF compatible SPICE SPK kernels from ISIS cubes
   
 | 
| std2isis | 
    Imports a cube from PNG, JPEG, JP2, BMP or TIFF format
   
 | 
| table2cube | 
    Converts a table to a cube
   
 | 
| tabledump | 
      Program to output a selected table to a file
   
 | 
| vicar2isis | 
    Import Vicar image file into Isis format
   
 | 
| cam2map | 
    Convert camera image to a map projection
   
 | 
| grid | 
    Add a graticule or rectangular grid to the input image
   
 | 
| map2cam | 
    Convert map projected image to a raw camera image
   
 | 
| map2map | 
    Modify a cube's map projection
   
 | 
| mapgrid | 
    Produces a user defined cartographic graticule (latitude/longitude grid) in
    GML form.
   
 | 
| maplab | 
    Add Mapping group to the labels of a cube
   
 | 
| mappt | 
    Outputs latitude/longitude at line/sample or reverse
   
 | 
| mapsize | 
    Compute size or scale of map
   
 | 
| maptemplate | 
      Create map file template for a projection
   
 | 
| maptrim | 
    Trim edges of a map projected image
   
 | 
| mosrange | 
    Compute the lat/lon range of a set of camera images for mosaicking
   
 | 
| nocam2map | 
    Map project a cube without a camera model
   
 | 
| pixel2map | 
    Convert camera image to a map projection using a forward driven algorithm
   
 | 
| ringscam2map | 
    Convert camera image to a map projection
   
 | 
| ringsmappt | 
    Outputs ring radius/longitude at line/sample or reverse
   
 | 
| skymap | 
    Convert camera image to a skymap projection
   
 | 
| algebra | 
    Performs algebra on either one or two cubes
   
 | 
| bandnorm | 
    Normalize bands in a cube
   
 | 
| cnethist | 
    Generates a histogram table and plot of the r^2 Residuals of input netfiles
   
 | 
| cubeavg | Averages all bands from the input cube 
 | 
| cubefunc | 
    This program will apply a chosen function to the input cube
   
 | 
| cubenorm | 
    Normalize columns or lines in a cube
   
 | 
| decorstretch | 
    Apply a Decorrelation Stretch to a cube
   
 | 
| fillgap | 
    Compute interpolations to replace special pixels.
   
 | 
| fx | 
    Apply generalized arithmetic operations using multiple cube files
   
 | 
| gaussstretch | 
    Apply a Gaussian Stretch to a cube.
   
 | 
| hist | 
    Generates a histogram table of cube in text format
   
 | 
| histeq | 
  Apply histogram equalization to a cube.
   
 | 
| histmatch | 
    Match histograms of 2 cubes
   
 | 
| hsv2rgb | 
   Convert HSV to RGB 
   
 | 
| lromakeflat | 
    Create a flat-field image for line-scan, push-frame, and framing instruments
   
 | 
| makeflat | 
    Create a flat-field image for line-scan instruments
   
 | 
| mvstats | 
    Generate multivariate Statistics for a cube
   
 | 
| pca | 
    Apply Principal Component Analysis on a cube
   
 | 
| poly | 
    Perform polynomial algebra on cube
   
 | 
| ratio | 
    Divide two cubes
   
 | 
| rgb2hsv | 
   Convert RGB to HSV 
   
 | 
| sigmastretch | 
    Apply a Sigma Stretch to a cube.
   
 | 
| stats | 
    Generates statistics about a cube
   
 | 
| camdev | 
    Creates photometric and geometric information bands for an image cube
   
 | 
| cosi | 
    Apply simple photometric model
   
 | 
| cubenorm | 
    Normalize columns or lines in a cube
   
 | 
| desmear | 
    Remove frame transfer smear
   
 | 
| desmile | 
    Resample an image to correct for spectral smile
   
 | 
| lineeq | 
      This program will normalize a cube based on line averages.
   
 | 
| lromakeflat | 
    Create a flat-field image for line-scan, push-frame, and framing instruments
   
 | 
| makeflat | 
    Create a flat-field image for line-scan instruments
   
 | 
| phocube | 
    Create photometric and geometric information bands for an image cube
   
 | 
| phoempglobal | 
    Fit empirical photometric functions to a Hapke model at several phase angles
   
 | 
| phoemplocal | 
    Fit empirical photometric functions to Hapke model at a single point
   
 | 
| phohillier | 
    Apply Hillier photometric correction to multiband cubes
   
 | 
| photemplate |  
    Create a PVL template for photometric correction
   
 | 
| photomet | 
    Perform photometric corrections on a cube
   
 | 
| shade | 
    Create shaded-relief cube from topographic cube
   
 | 
| shadow | 
    Create a high accuracy hillshade with shadow casting
   
 | 
| shadowtau | 
   Estimate optical depth (tau) using information from shadow measurements
   
 | 
| tonematch | 
    Matches the tone of two, single-band images
   
 | 
| camcoeffs | 
    This program calculates TRANSX,TRANSY from TRANSS, TRANSL for iak kernels
   
 | 
| camtest | Perform basic camera accuracy tests 
 | 
| cnetdiff | Compare two control networks 
 | 
| csspckgen | 
    Creates a new Cassini PCK SPICE DB file for the latest date-versioned PCKs
   
 | 
| cubediff | 
    Compare two cubes for differences
   
 | 
| dempack | 
    Creates an XML representation of DEM installation packs
   
 | 
| demprep | 
    This program prepares DEMs for use as shape models. It is not valid to run this program on anything but a DEM.
   
 | 
| fakecube | 
    Create geometric testing cubes
   
 | 
| isisdataeval | 
    Evaluate ISISDATA structure and validity
   
 | 
| kerneldbgen | 
    Creates a database of kernels
   
 | 
| messckgen | 
    Generates MESSENGER CKs
   
 | 
| messspkgen | 
    Generates MESSENGER SPKs
   
 | 
| prtloganalyzer | 
    Analyze program execution efficiency in ISIS print.prt logs
   
 | 
| pvldiff | Compare two pvl files 
 | 
| bandtrim | 
    Propagates a NULL in any band to all other bands
   
 | 
| camtrim | 
    Trims pixels outside of lat/lon range
   
 | 
| circle | 
    Trims data outside of a circle
   
 | 
| crop | 
    Extracts a sub-area from a cube 
   
 | 
| cropspecial | 
    Crops specified special pixels from a cube
   
 | 
| maptrim | 
    Trim edges of a map projected image
   
 | 
| mask | 
    Set pixels to NULL using a mask cube
   
 | 
| outline | 
    Outlines contiguous regions in a cube
   
 | 
| photrim | 
    Trims pixels outside of phase, incidence, and emission angles
   
 | 
| trim | 
    Trim edges of input cube
   
 | 
| trimfilter | 
    Apply a trim filter to a cube
   
 | 
| uncrop | 
    Puts a sub-cube back into its parent cube
   
 | 
| barscale | 
    Creates a bar scale for an image
   
 | 
| bit2bit | 
    Change the bit-type of pixel data
   
 | 
| cathist | 
    Outputs the history of a cube
   
 | 
| catlab | 
    Outputs the label from a cube
   
 | 
| catoriglab | 
    Outputs the original labels of a cube
   
 | 
| copylabel | 
    Copys labels and blobs from one cube into another cube.
   
 | 
| cubeatt | 
      Cube attribute editor
   
 | 
| cubediff | 
    Compare two cubes for differences
   
 | 
| cubeit | 
    Stacks individual cubes into one cube
   
 | 
| editlab | Modifies cube labels 
 | 
| errors | 
    Parses errors from a SessionLog file
     
 | 
| explode | 
    Extracts each band of a cube into a separate one band file
   
 | 
| findgaps | 
    Finds the gaps in a given Cube.
   
 | 
| greyscale | Generate a grey scale cube 
 | 
| grid | 
    Add a graticule or rectangular grid to the input image
   
 | 
| isisdataeval | 
    Evaluate ISISDATA structure and validity
   
 | 
| isisminer | 
       Run a series of algorithms (Strategies) that perform various operations on input 
       sources (Resources)
   
 | 
| makecube | Generate a cube with a constant value 
 | 
| pad | 
    Add NULL padding around a cube
   
 | 
| segment |  Divides a cube object into multiple output cubes in the line direction.  
 | 
| specadd | 
      Adds special pixels from a match cube to an input cube
   
 | 
| specpix | 
    Replace user specified pixels with Isis special pixel values
   
 | 
| stretch | 
    Remaps pixel values in a cube
   
 | 
| sumspice | 
    Update ISIS start times, pointing and spacecraft position with Gaskell SPC
  SUMFILEs
   
 | 
| trackextract | 
    Removes the tracking band from a mosaic and places it into a new tracking cube.
   
 | 
| lrolola2isis | 
    Imports LIDAR data from LRO LOLA instrument.
   
 | 
| lronac2isis | 
      Import an LROC NAC image as an Isis cube
     
 | 
| lronac2pds | 
    Convert from cube to pds format
   
 | 
| lronaccal | 
    Radiometrically calibrates a LROC NAC image
   
 | 
| lronacecho | 
    Removes echo effects from a LRO NAC image
   
 | 
| lronacpho | 
    Apply general LROC NAC photometric correction to multiband cubes
   
 | 
| lrowac2isis | 
    Import LRO WAC EDR images to ISIS cube format
   
 | 
| lrowac2pds | 
    Convert from cube to PDS IMG format
   
 | 
| lrowaccal | 
    This program calibrates LRO WAC images
   
 | 
| lrowacpho | 
    Apply Hillier or Exponential photometric correction to multiband cubes
   
 | 
| lrowacphomap | 
    Apply Hapke bidirectional reflectance model photometric correction to multiband cubes
   
 | 
| mrf2isis | Import PDS formatted MiniRF level 1 or level 2 image cube into Isis format cube 
 | 
| mrf2pds |  Export a Mini-RF isis cube to a pds image 
 | 
| crism2isis | Import MRO CRISM PDS image cube into Isis format cube 
 | 
| ctxcal | 
    Radiometrically calibrates a CTX image
   
 | 
| ctxevenodd | 
    Remove even/odd detector striping from MRO Ctx images
   
 | 
| hi2isis | 
    Import HiRISE EDR images into Isis cube format
   
 | 
| hical | 
    Performs radiometric calibration of HiRISE channel images
   
 | 
| hicalbeta | 
    Performs radiometric calibration of HiRISE channel images
   
 | 
| hicalproc | 
     Generate radiometrically (cosmetic) corrected HiRISE Channel products.
   
 | 
| hiccdstitch | 
    Stitch together multiple HiRISE CCD images
   
 | 
| hicolormos | 
    Create a color mosaic of HiRISE cubes and update labels (required by hirdrgen).
   
 | 
| hicrop | 
    This program extracts a sub-area from a HiRise cube. 
   
 | 
| hicubeit | 
    Stack slithered HiRISE red, bg, and ir cubes
   
 | 
| hicubenorm | 
    Normalize columns in a HiRise cube by performing a lowpass/highpass filter
   
 | 
| hideal2pds | 
      Export an Isis mosaicked ideal cube from a HiRISE image to a PDS product
      containing related spice data.
   
 | 
| hidestripe | 
    Corrects a known striping pattern in HiRISE images.
   
 | 
| hidtmgen | 
    Generates PDS products from a DTM and/or orthorectified images.
   
 | 
| hiequal | 
      Tonematches a set of HiRISE cubes prior to mosaicking
   
 | 
| hifringe | 
    Gathers statistics on the first and last several samples of a channel
   
 | 
| hifurrows | 
    Null furrowed pixels 
   
 | 
| higlob | 
    Combines HiRISE image data with all pixel data in the blobs
   
 | 
| hijitreg | 
       Characterize HiRISE image jitter with co-registration
   
 | 
| hijitter | 
     Correct jitter in input cubes and output corrected undistorted cubes
   
 | 
| himos | 
    Produce an output mosaic of HiRISE CCD images from the same observation and filter.
   
 | 
| hinoise | 
    Perform NoiseFilter processing in the Pipeline Enviornment.
   
 | 
| hirdr2isis | Import PDS formatted HiRISE RDR image cube into Isis format cube 
 | 
| hirdrgen | 
      Converts HiRISE RDR cubes into PDS standard format
   
 | 
| hisharpen | 
HiSharpen uses a linear frequency domain filter to remove the minor
blur caused by the optical system of the HiRISE camera.
     
 | 
| histat | 
    Generates statistics about a HiRISE cube and ancillary data
   
 | 
| histitch | 
    Merge a HiRISE channel pair to make a single image
   
 | 
| marci2isis | 
      Import an MRO MARCI image to an Isis cube
     
 | 
| marcical | 
    This program calibrates MARCI images
   
 | 
| marciflip | 
      Flip the framelets on an MRO MARCI image
     
 | 
| mroctx2isis | 
      Import an MRO CTX image as an Isis cube
     
 | 
| pds2hideal | 
      Reimport an exported hirise PDS product to an Isis Ideal camera.
   
 |